Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 AC024067.1-201ENST00000426199 223 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 RNU6-155P-201ENST00000516347 100 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 MIR3145-201ENST00000580727 82 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 AC104465.1-201ENST00000611365 139 ntBASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
FOXP3Q9BZS1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 Y_RNA.398-201ENST00000383952 99 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AL591034.1-201ENST00000407447 340 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 MIR320B2-201ENST00000408479 138 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AL451074.5-201ENST00000415894 435 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 PTGES3P4-201ENST00000426243 356 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 BX510359.1-201ENST00000456973 237 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 snoU13.28-201ENST00000459235 104 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AP002001.1-203ENST00000534002 267 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 AC091152.3-201ENST00000604227 325 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 SNRPGP20-201ENST00000604477 205 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 RNU6-91P-201ENST00000607774 107 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 MIR3674-201ENST00000636576 68 ntBASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXP3Q9BZS1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 Y_RNA.8-201ENST00000362353 102 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RNU6-1272P-201ENST00000362776 107 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RNA5SP50-201ENST00000363731 107 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RNU6-748P-201ENST00000384648 107 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AL357139.1-201ENST00000407792 426 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AC009963.1-201ENST00000417265 157 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RPL32P34-201ENST00000486380 400 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AC105137.2-201ENST00000569073 466 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 MIR3923-201ENST00000579521 83 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 MIR5195-201ENST00000583555 115 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 AL713866.2-201ENST00000603579 219 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 MIR6076-201ENST00000617521 113 ntBASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
FOXP3Q9BZS1 RNU6-1248P-201ENST00000391096 64 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 CBX3P9-201ENST00000402326 552 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 RN7SKP111-201ENST00000410349 271 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 RPS15AP5-201ENST00000436276 388 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AL714022.1-201ENST00000439897 151 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 SNORD105B-201ENST00000458770 79 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AC107626.1-201ENST00000471084 183 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AC103975.1-201ENST00000482506 483 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 DEFB117-201ENST00000602356 141 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AP001485.1-201ENST00000604799 199 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AL034555.1-201ENST00000604816 211 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 AL008718.3-201ENST00000610217 321 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXP3Q9BZS1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
FOXP3Q9BZS1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RNU6-727P-201ENST00000363592 107 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RNU6-81P-201ENST00000365608 104 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RNU6-19P-201ENST00000384718 107 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RNU5E-9P-201ENST00000411164 104 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 AC096649.2-201ENST00000416186 393 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 snoU13.14-201ENST00000459372 104 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 RPS15AP11-201ENST00000594193 385 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 AL133393.1-201ENST00000603277 287 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXP3Q9BZS1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms