Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU1-109P-201ENST00000383960 147 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 RNU6-26P-201ENST00000383985 107 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.428-201ENST00000384078 102 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 U8.10-201ENST00000384260 133 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 MIR764-201ENST00000390811 85 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 RNA5SP210-201ENST00000391034 120 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AL078595.1-201ENST00000404458 226 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AC092423.1-201ENST00000430165 186 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AC009238.1-201ENST00000442165 424 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
RTFDC1Q9BY42 AC009237.6-201ENST00000446969 424 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AP000705.1-201ENST00000454567 350 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 RNU7-26P-201ENST00000458980 63 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 MIR2355-201ENST00000517199 87 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AC046143.2-201ENST00000609789 160 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 AL138825.1-201ENST00000618587 192 ntBASIC3□□□□□ -1.93
RTFDC1Q9BY42 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RTFDC1Q9BY42 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3□□□□□ -1.93
RTFDC1Q9BY42 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3□□□□□ -1.93
RTFDC1Q9BY42 BX322639.1-202ENST00000423987 2213 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.364-201ENST00000365532 101 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 RNU2-32P-201ENST00000411193 191 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 HMGN2P35-201ENST00000412164 270 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 USP9YP16-201ENST00000430287 407 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 Z82188.1-201ENST00000436709 154 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 USP9YP23-201ENST00000455085 407 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AC027575.1-201ENST00000481064 460 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AC015712.3-201ENST00000559380 164 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 AC090517.1-201ENST00000569307 266 ntBASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
RTFDC1Q9BY42 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 MTND5P6-201ENST00000422338 1798 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.197-201ENST00000364004 102 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 RNU4-76P-201ENST00000364509 141 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 RN7SL297P-201ENST00000483161 293 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 RNU6-1114P-201ENST00000516022 107 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 SNORD116.3-201ENST00000517176 78 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 DEFB122-202ENST00000569013 197 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 TCL6_2.1-201ENST00000615162 119 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 AC005562.2-201ENST00000618264 111 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 MIR1291-201ENST00000627649 87 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 AC006026.1-201ENST00000444025 1803 ntBASIC2.98□□□□□ -1.93
RTFDC1Q9BY42 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 SNORD114-1-201ENST00000362705 72 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 RNU6-99P-201ENST00000364721 107 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 MIR559-201ENST00000385188 96 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 RNU6-1156P-201ENST00000410365 100 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 MTCO3P29-201ENST00000432119 779 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 IFNA11P-201ENST00000446352 526 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 Y_RNA.639-201ENST00000458981 102 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 MIR2053-201ENST00000459295 91 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 TOMM22P6-201ENST00000465035 409 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 RNA5SP281-201ENST00000516504 135 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AL080274.1-201ENST00000605565 220 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 AL355802.3-201ENST00000607571 545 ntBASIC2.97□□□□□ -1.93
RTFDC1Q9BY42 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC092881.1-201ENST00000638218 2733 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU6-1115P-201ENST00000362490 106 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU6-944P-201ENST00000364023 107 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 Y_RNA.252-201ENST00000364556 101 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU6-611P-201ENST00000384276 104 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU1-139P-201ENST00000391307 165 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AL357139.1-201ENST00000407792 426 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AL591806.2-201ENST00000433122 173 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 HMGN2P3-201ENST00000433603 273 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 HMGN2P5-201ENST00000436882 273 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC096638.1-201ENST00000444678 216 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AL035666.1-201ENST00000446195 348 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 RNU6-58P-201ENST00000517143 103 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC021269.2-201ENST00000532318 330 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC027288.2-201ENST00000553028 243 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC090617.3-201ENST00000573670 475 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 AC023043.3-201ENST00000593113 385 ntBASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RTFDC1Q9BY42 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RTFDC1Q9BY42 RNU1-115P-201ENST00000365329 160 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms