Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 U2.11-201ENST00000616345 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.2-201ENST00000616535 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.3-201ENST00000617785 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.19-201ENST00000618602 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 RNU2-1-201ENST00000618664 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.6-201ENST00000619225 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.5-201ENST00000619465 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 U2.10-201ENST00000620268 191 ntBASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
RTP3Q9BQQ7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 MIR337-201ENST00000362281 93 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.187-201ENST00000363918 113 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.533-201ENST00000384596 114 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 RNA5SP213-201ENST00000391031 106 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 RPL23AP50-201ENST00000434149 455 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 GPM6BP3-201ENST00000442797 145 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC079354.2-201ENST00000453523 154 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AL353752.1-201ENST00000454946 260 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 ELOCP24-201ENST00000456370 334 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC027575.1-201ENST00000481064 460 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 HMGB1P35-201ENST00000503360 598 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC093303.1-201ENST00000514549 295 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 SNORA31.16-201ENST00000516773 139 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 PRELID2P1-201ENST00000552837 301 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC007375.1-201ENST00000554513 578 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AC080078.3-201ENST00000605407 463 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 AL160413.1-201ENST00000622780 310 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 SNORD98-201ENST00000636377 67 ntBASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
RTP3Q9BQQ7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC092268.1-201ENST00000342691 405 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.146-201ENST00000363549 102 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 RNU6-890P-201ENST00000384121 107 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 SNORA26.3-201ENST00000391119 136 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC019129.1-201ENST00000403786 261 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AL590135.1-201ENST00000422215 156 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC019205.3-201ENST00000424573 156 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC016700.2-201ENST00000446011 156 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 RNU7-152P-201ENST00000458982 64 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC015911.1-201ENST00000495111 156 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC022447.4-201ENST00000504053 364 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 RNU6-120P-201ENST00000516077 103 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 CBX3P8-201ENST00000532412 525 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC093249.1-201ENST00000567049 203 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AL078605.1-201ENST00000603529 500 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 AL713866.2-201ENST00000603579 219 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 MTND5P9-201ENST00000503854 1755 ntBASIC2.25□□□□□ -2.05
RTP3Q9BQQ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 MIR583-201ENST00000384846 75 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 SNORA75.6-201ENST00000391318 127 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 AL139156.1-201ENST00000412785 841 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 EIF4EP2-201ENST00000422816 654 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 MIR5696-201ENST00000578474 85 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 MIR3136-201ENST00000583498 78 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 AC005899.2-201ENST00000584353 90 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 AC133104.2-201ENST00000615272 193 ntBASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
RTP3Q9BQQ7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.315-201ENST00000365117 102 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU6-142P-201ENST00000384019 107 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 SNORA29-201ENST00000384183 140 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 MTND1P14-201ENST00000427400 950 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 Y_RNA.701-201ENST00000516812 110 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 AC016256.1-201ENST00000547971 354 ntBASIC2.23□□□□□ -2.05
RTP3Q9BQQ7 AC021231.3-201ENST00000558497 370 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms