Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 NDUFB4P6-201ENST00000436819 366 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC098831.1-201ENST00000440661 216 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AL031659.1-201ENST00000447075 539 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 RPL21P39-201ENST00000463605 483 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 SNRPGP7-201ENST00000469016 106 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC107032.1-201ENST00000485945 480 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC132942.1-201ENST00000486753 483 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 RPL30P1-201ENST00000488676 339 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC093591.1-201ENST00000491435 481 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 RPL21P16-201ENST00000495531 483 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 SNORA43.2-201ENST00000516652 128 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.62□□□□□ -1.99
MEIS3Q99687 AC034114.1-201ENST00000520293 285 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.62□□□□□ -1.99
MEIS3Q99687 IGKV3-31-201ENST00000523109 329 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC023824.2-201ENST00000566185 400 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC136932.1-201ENST00000574771 208 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 MIR4782-201ENST00000577987 79 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 MIR3945-201ENST00000581853 98 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.62□□□□□ -1.99
MEIS3Q99687 AL138825.1-201ENST00000618587 192 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 U6.92-201ENST00000636464 89 ntBASIC2.62□□□□□ -1.99
MEIS3Q99687 MIRLET7G-201ENST00000362280 84 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 Y_RNA.16-201ENST00000362421 102 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 RNU6-942P-201ENST00000363002 107 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 snoU2_19.2-201ENST00000363024 80 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 RNU6-527P-201ENST00000363425 104 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 Y_RNA.143-201ENST00000363520 106 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 RNU6-105P-201ENST00000363909 104 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 SNORD27-201ENST00000363981 72 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 SNORA70B-201ENST00000384210 135 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 RPS29P13-201ENST00000402041 169 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 AL139095.1-201ENST00000404326 391 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 MIR1290-201ENST00000408735 78 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 RNU6-1077P-201ENST00000410506 102 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 AL590383.1-201ENST00000428602 75 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 MTND2P29-201ENST00000438595 412 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.61□□□□□ -1.99
MEIS3Q99687 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.61□□□□□ -1.99
MEIS3Q99687 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.61□□□□□ -1.99
MEIS3Q99687 RNU6-111P-201ENST00000517179 105 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 AC109479.2-201ENST00000517842 174 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.61□□□□□ -1.99
MEIS3Q99687 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.61□□□□□ -1.99
MEIS3Q99687 FTX_3.1-201ENST00000610451 147 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 SDR42E1P4-201ENST00000620894 481 ntBASIC2.61□□□□□ -1.99
MEIS3Q99687 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MEIS3Q99687 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.61□□□□□ -1.99
MEIS3Q99687 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MEIS3Q99687 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MEIS3Q99687 AC009541.1-201ENST00000438279 2662 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 OR56A5-201ENST00000340110 738 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-212P-201ENST00000362642 104 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 Y_RNA.84-201ENST00000363011 104 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-778P-201ENST00000363269 103 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 Y_RNA.276-201ENST00000364732 109 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-926P-201ENST00000384075 107 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-1093P-201ENST00000391194 107 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-847P-201ENST00000411115 108 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 MTCO3P19-201ENST00000415864 321 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.6□□□□□ -1.99
MEIS3Q99687 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.6□□□□□ -1.99
MEIS3Q99687 AC243964.1-201ENST00000441814 261 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.6□□□□□ -1.99
MEIS3Q99687 TRBVB-201ENST00000477100 408 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-581P-201ENST00000516214 105 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RNU6-703P-201ENST00000516946 107 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 AC022868.1-201ENST00000517767 391 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 MIR4648-201ENST00000580107 72 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 Y_RNA.783-201ENST00000613546 102 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 AP001282.2-201ENST00000616149 309 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 MIR6076-201ENST00000617521 113 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 U2.21-201ENST00000637295 81 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.6□□□□□ -1.99
MEIS3Q99687 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
MEIS3Q99687 SNORD56.1-201ENST00000362913 68 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RNU6-270P-201ENST00000364131 105 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 Y_RNA.237-201ENST00000364439 102 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RNA5SP160-201ENST00000364866 120 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RNU6-217P-201ENST00000384164 104 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 SNORD116-20-201ENST00000384529 92 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 SNORA1.3-201ENST00000384676 136 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RNU2-25P-201ENST00000411041 191 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 AL358453.1-201ENST00000422522 250 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.59□□□□□ -1.99
MEIS3Q99687 RNA5SP310-201ENST00000459084 116 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RPL39P38-201ENST00000467018 153 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 AF186996.7-201ENST00000492781 209 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 SNORD59.2-201ENST00000516873 68 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 RNU6-711P-201ENST00000517255 106 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 DEFB108E-201ENST00000524692 240 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.59□□□□□ -1.99
MEIS3Q99687 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.59□□□□□ -1.99
MEIS3Q99687 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.59□□□□□ -1.99
MEIS3Q99687 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.59□□□□□ -2
MEIS3Q99687 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
MEIS3Q99687 AC233981.2-201ENST00000611524 1614 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms