Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL118558.2-201ENST00000556294 238 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AP005136.1-201ENST00000579765 429 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 MIR3976-201ENST00000606807 139 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC007684.1-201ENST00000609671 477 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC103705.1-201ENST00000619013 241 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AP000770.2-201ENST00000623694 100 ntBASIC1.36□□□□□ -2.19
RPRD1AQ96P16 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
RPRD1AQ96P16 Y_RNA.1-201ENST00000352915 104 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RNU6-562P-201ENST00000362731 107 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 Y_RNA.132-201ENST00000363421 102 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 SNORA63D-201ENST00000364359 132 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RNU6-418P-201ENST00000384035 107 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 SNORA29-201ENST00000384183 140 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RNU6-360P-201ENST00000390944 104 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AL663109.1-201ENST00000411498 844 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC090960.1-201ENST00000421072 306 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC060773.1-201ENST00000421698 310 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 Z82205.1-201ENST00000428456 297 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 MTND3P9-201ENST00000429526 346 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 TPTE2P5-203ENST00000458118 728 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RPS26P55-201ENST00000471178 356 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RPS3AP17-201ENST00000472594 777 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RPL36AP21-201ENST00000490372 323 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC108078.1-201ENST00000508073 725 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC079140.3-201ENST00000511111 550 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 SNORA40.12-201ENST00000516329 111 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC104576.1-201ENST00000524225 88 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 CENPUP1-201ENST00000526649 1202 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AP003033.1-201ENST00000527244 415 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC016256.1-201ENST00000547971 354 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AC008088.1-201ENST00000580993 280 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.35□□□□□ -2.19
RPRD1AQ96P16 MIR8063-201ENST00000621930 81 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 Z69908.1-201ENST00000622603 247 ntBASIC1.35□□□□□ -2.19
RPRD1AQ96P16 ICE2P2-201ENST00000483823 2787 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 RNU5B-2P-201ENST00000363036 113 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 RNU6-1019P-201ENST00000364424 107 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 RNU2-7P-201ENST00000410794 178 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC067942.3-201ENST00000512025 362 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 RNU6-1069P-201ENST00000516612 133 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC025423.5-201ENST00000550230 219 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC119751.7-201ENST00000600494 245 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC092747.3-201ENST00000603769 301 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 AC016727.2-201ENST00000603988 621 ntBASIC1.34□□□□□ -2.19
RPRD1AQ96P16 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
RPRD1AQ96P16 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.296-201ENST00000364930 108 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.378-201ENST00000365652 113 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 SNORD116-8-201ENST00000384365 95 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 MIR1283-1-201ENST00000408494 87 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.33□□□□□ -2.2
RPRD1AQ96P16 MTCO1P19-201ENST00000443487 500 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AC091133.4-201ENST00000511142 308 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AC011406.1-201ENST00000512440 370 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 RN7SKP298-201ENST00000515950 94 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.33□□□□□ -2.2
RPRD1AQ96P16 OSBPL9P5-201ENST00000542581 171 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AC005562.2-201ENST00000618264 111 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 AC126177.8-201ENST00000618339 1015 ntBASIC1.33□□□□□ -2.2
RPRD1AQ96P16 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.33□□□□□ -2.2
RPRD1AQ96P16 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 RNU6-1317P-201ENST00000364582 104 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 RNU6-1329P-201ENST00000365664 107 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 Y_RNA.553-201ENST00000384670 102 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 MIR300-201ENST00000401138 83 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AC004866.1-201ENST00000411748 78 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 OR2AQ1P-201ENST00000451972 200 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 RPL31P58-201ENST00000469001 379 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 RNA5SP384-201ENST00000516615 116 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AC087854.1-201ENST00000519706 414 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.32□□□□□ -2.2
RPRD1AQ96P16 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 Z99497.2-201ENST00000603634 310 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AL353149.1-201ENST00000610667 244 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 AL121757.2-201ENST00000611223 313 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 BX322639.1-202ENST00000423987 2213 ntBASIC1.32□□□□□ -2.2
RPRD1AQ96P16 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPRD1AQ96P16 RNU6-82P-201ENST00000363970 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms