Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.31□□□□□ -2.2
USP47Q96K76 C1DP4-201ENST00000455429 424 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 RPS23P5-201ENST00000495419 428 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 RNU6-567P-201ENST00000516746 107 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 AL137161.1-201ENST00000532231 390 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 MIR3973-201ENST00000579824 107 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 AC072046.2-201ENST00000618366 268 ntBASIC1.31□□□□□ -2.2
USP47Q96K76 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
USP47Q96K76 RNU6-1120P-201ENST00000362988 108 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 Y_RNA.295-201ENST00000364918 102 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 MIR208B-201ENST00000401172 77 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 RNU2-7P-201ENST00000410794 178 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.3□□□□□ -2.2
USP47Q96K76 C8orf59P1-201ENST00000429930 303 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 MTCO2P11-201ENST00000431069 680 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 AC002486.1-201ENST00000435098 391 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 RNU7-167P-201ENST00000459160 62 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.3□□□□□ -2.2
USP47Q96K76 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.3□□□□□ -2.2
USP47Q96K76 AC090517.1-201ENST00000569307 266 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.3□□□□□ -2.2
USP47Q96K76 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 MIR3941-201ENST00000582572 103 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 MIR4760-201ENST00000585040 80 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 Z94722.1-201ENST00000604328 474 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 MIR6857-201ENST00000613267 93 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.3□□□□□ -2.2
USP47Q96K76 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.3□□□□□ -2.2
USP47Q96K76 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.3□□□□□ -2.2
USP47Q96K76 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USP47Q96K76 RNU6-1026P-201ENST00000384465 108 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
USP47Q96K76 RNU6-360P-201ENST00000390944 104 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.29□□□□□ -2.2
USP47Q96K76 MTND2P9-201ENST00000422293 931 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AC012306.1-201ENST00000423267 114 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.29□□□□□ -2.2
USP47Q96K76 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AL031667.1-201ENST00000440222 725 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 MTND1P27-201ENST00000451117 902 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 RPL26P26-201ENST00000480251 434 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AL163973.1-201ENST00000484753 577 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.29□□□□□ -2.2
USP47Q96K76 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.29□□□□□ -2.2
USP47Q96K76 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.29□□□□□ -2.2
USP47Q96K76 AP003034.1-201ENST00000534621 422 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
USP47Q96K76 AC040904.1-201ENST00000590850 223 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.29□□□□□ -2.2
USP47Q96K76 U2.17-201ENST00000611454 95 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 MIR8063-201ENST00000621930 81 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AC121333.1-201ENST00000567488 2709 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
USP47Q96K76 AC010615.1-201ENST00000594254 1764 ntBASIC1.29□□□□□ -2.2
USP47Q96K76 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
USP47Q96K76 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 Y_RNA.132-201ENST00000363421 102 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 Y_RNA.169-201ENST00000363745 96 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 MIR520A-201ENST00000384862 85 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.28□□□□□ -2.2
USP47Q96K76 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.28□□□□□ -2.2
USP47Q96K76 MTATP6P18-201ENST00000417994 673 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 CETN4P-201ENST00000432407 469 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 JTBP1-201ENST00000441314 247 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.28□□□□□ -2.2
USP47Q96K76 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.28□□□□□ -2.2
USP47Q96K76 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.28□□□□□ -2.2
USP47Q96K76 AC016925.1-201ENST00000458303 298 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 snoU13.30-201ENST00000458951 104 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 RNU6-1132P-201ENST00000459214 107 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 MTND3P7-201ENST00000474435 343 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.28□□□□□ -2.2
USP47Q96K76 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.28□□□□□ -2.2
USP47Q96K76 CBX3P8-201ENST00000532412 525 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.28□□□□□ -2.2
USP47Q96K76 MIR5583-1-201ENST00000580941 59 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 RPL17P51-201ENST00000605218 238 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 AC064807.4-201ENST00000607201 407 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
USP47Q96K76 SNORA43.4-201ENST00000629559 138 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 AC095038.3-201ENST00000634439 195 ntBASIC1.28□□□□□ -2.2
USP47Q96K76 RNU6-545P-201ENST00000362681 104 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 RNU4-41P-201ENST00000364426 143 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 RNU6-1093P-201ENST00000391194 107 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 MTCYBP8-201ENST00000422855 651 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.27□□□□□ -2.21
USP47Q96K76 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.27□□□□□ -2.21
USP47Q96K76 AL356010.1-201ENST00000456364 102 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC010531.2-201ENST00000465012 153 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC010486.2-201ENST00000505572 483 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AC079140.3-201ENST00000511111 550 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 RNA5SP384-201ENST00000516615 116 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 AL391840.1-201ENST00000571144 367 ntBASIC1.27□□□□□ -2.21
USP47Q96K76 FAM71BP1-201ENST00000604431 523 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms