Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC004386.2-201ENST00000441858 148 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC136Q96JN2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC136Q96JN2 MIR5002-201ENST00000584713 97 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC136Q96JN2 AC009831.4-201ENST00000620744 325 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 uc_338.20-201ENST00000621563 178 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 AL359757.2-201ENST00000624309 274 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.81□□□□□ -1.96
CCDC136Q96JN2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC136Q96JN2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 MIR449A-201ENST00000362113 91 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 RNU6-593P-201ENST00000364716 112 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 SNORA67.4-201ENST00000384688 142 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 RPL23AP7-203ENST00000449021 469 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 MTCO3P8-201ENST00000453691 755 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 snoU13.30-201ENST00000458951 104 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 RPS23P5-201ENST00000495419 428 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 RNU2-44P-201ENST00000516795 194 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AP005660.1-201ENST00000522972 293 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 MIR5006-201ENST00000583027 110 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AC243960.4-201ENST00000600532 288 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC136Q96JN2 ZNF204P-201ENST00000416749 2397 ntBASIC2.8□□□□□ -1.96
CCDC136Q96JN2 ZNF299P-201ENST00000406845 1804 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNU6-438P-201ENST00000365561 103 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 Y_RNA.404-201ENST00000383978 102 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 Y_RNA.482-201ENST00000384377 111 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 MIR597-201ENST00000384968 97 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNA5SP450-201ENST00000411206 102 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNU6-1304P-201ENST00000411374 106 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNA5SP24-201ENST00000516478 95 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNA5SP384-201ENST00000516615 116 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNA5SP364-201ENST00000516938 78 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 Y_RNA.708-201ENST00000516950 96 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 AC016727.1-205ENST00000605437 569 ntBASIC2.79□□□□□ -1.96
CCDC136Q96JN2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
CCDC136Q96JN2 RNU6-545P-201ENST00000362681 104 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 RNU6-595P-201ENST00000363944 107 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC136Q96JN2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC245102.2-201ENST00000448956 180 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AL021397.1-201ENST00000451806 248 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC007215.1-201ENST00000464893 276 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC105029.1-201ENST00000520250 669 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AL590240.4-201ENST00000616908 390 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC137590.2-201ENST00000619709 240 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 AC099654.5-201ENST00000636479 350 ntBASIC2.78□□□□□ -1.96
CCDC136Q96JN2 MTND4P1-201ENST00000457501 1466 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 SNORD115-32-201ENST00000364079 82 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 SNORD114-6-201ENST00000364393 72 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 RNA5SP160-201ENST00000364866 120 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.405-201ENST00000383979 100 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.451-201ENST00000384200 100 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.524-201ENST00000384564 100 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.561-201ENST00000384694 100 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 RNU6-331P-201ENST00000384724 107 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 MIR221-201ENST00000385135 110 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 MIR29C-201ENST00000385231 88 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC136Q96JN2 AL353997.1-201ENST00000432936 108 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 AL121579.1-201ENST00000555129 305 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 AC005014.2-201ENST00000607795 599 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 RMST_6.1-201ENST00000611980 203 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC136Q96JN2 CTSLP2-204ENST00000629029 392 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.77□□□□□ -1.97
CCDC136Q96JN2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
CCDC136Q96JN2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC136Q96JN2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC136Q96JN2 MTND4P12-201ENST00000498999 1377 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC136Q96JN2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CCDC136Q96JN2 MIR340-201ENST00000362125 95 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 SNORD31B-201ENST00000364977 69 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.319-201ENST00000365138 92 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 MIR153-2-201ENST00000385225 87 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 RN7SKP284-201ENST00000411002 343 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AC139712.2-201ENST00000424302 339 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 HMGN2P3-201ENST00000433603 273 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 HMGN2P5-201ENST00000436882 273 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 Y_RNA.635-201ENST00000459041 101 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 AC025033.1-201ENST00000463883 194 ntBASIC2.76□□□□□ -1.97
CCDC136Q96JN2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms