Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 RNU6-307P-201ENST00000516743 106 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SEMA4DQ92854 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.22□□□□□ -2.05
SEMA4DQ92854 AP002770.2-201ENST00000543613 532 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 AC009127.3-201ENST00000570531 403 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 AL133255.1-201ENST00000606374 441 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 AC126177.8-201ENST00000618339 1015 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.22□□□□□ -2.05
SEMA4DQ92854 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SEMA4DQ92854 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SEMA4DQ92854 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SEMA4DQ92854 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 Y_RNA.187-201ENST00000363918 113 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 Y_RNA.597-201ENST00000410463 100 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 OR2AQ1P-201ENST00000451972 200 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 RN7SKP210-201ENST00000459176 261 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA4DQ92854 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA4DQ92854 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA4DQ92854 AC104581.2-201ENST00000572227 430 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 AC073544.1-201ENST00000600110 1595 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 AL355297.2-201ENST00000604792 129 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
SEMA4DQ92854 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA4DQ92854 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
SEMA4DQ92854 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.21□□□□□ -2.06
SEMA4DQ92854 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 RNU6-890P-201ENST00000384121 107 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 SNORA12-201ENST00000391162 147 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 RNU2-48P-201ENST00000410694 191 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AL590556.1-201ENST00000423231 483 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 MTND4P28-201ENST00000426217 387 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 CBX3P6-201ENST00000430257 527 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 snoU13.30-201ENST00000458951 104 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AC018868.1-201ENST00000491307 315 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AL590705.4-201ENST00000532209 134 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 EIF4A1P12-201ENST00000551910 141 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 SUB1P3-201ENST00000564581 315 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 AC084781.2-201ENST00000615568 161 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AC137590.2-201ENST00000619709 240 ntBASIC2.2□□□□□ -2.06
SEMA4DQ92854 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA4DQ92854 AC006026.1-201ENST00000444025 1803 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA4DQ92854 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA4DQ92854 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNY1P16-201ENST00000363063 111 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 U3.9-201ENST00000363823 204 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SNORD115-8-201ENST00000363856 82 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SNORD115-38-201ENST00000365037 82 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 Y_RNA.315-201ENST00000365117 102 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 Y_RNA.431-201ENST00000384086 102 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU6-17P-201ENST00000384245 107 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU6-18P-201ENST00000384527 107 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 MIR559-201ENST00000385188 96 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 MIR561-201ENST00000385216 97 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SNORA12.2-201ENST00000391040 156 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 MIR208B-201ENST00000401172 77 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RPS20P15-201ENST00000412792 311 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 AC007215.1-201ENST00000464893 276 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU6-470P-201ENST00000515954 104 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 MIR5089-201ENST00000580047 84 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RMST_6.1-201ENST00000611980 203 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 AC133104.2-201ENST00000615272 193 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.19□□□□□ -2.06
SEMA4DQ92854 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA4DQ92854 MTND5P10-201ENST00000603719 1809 ntBASIC2.19□□□□□ -2.06
SEMA4DQ92854 RNU6-1040P-201ENST00000383974 107 ntBASIC2.18□□□□□ -2.06
SEMA4DQ92854 AL079342.1-201ENST00000401460 267 ntBASIC2.18□□□□□ -2.06
SEMA4DQ92854 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SEMA4DQ92854 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA4DQ92854 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA4DQ92854 RPL30P15-201ENST00000457129 321 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms