Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MIR3609-201ENST00000582661 80 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC037487.3-201ENST00000606668 112 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 AC027309.3-201ENST00000623419 351 ntBASIC3.4□□□□□ -1.87
SH3RF3Q8TEJ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNA5SP361-201ENST00000362686 118 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.215-201ENST00000364204 112 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.217-201ENST00000364214 105 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNU1-112P-201ENST00000364401 164 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-336P-201ENST00000364891 107 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNU4-9P-201ENST00000364951 139 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNU5A-5P-201ENST00000411054 116 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC007395.1-201ENST00000451333 677 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 FABP5P15-201ENST00000453566 214 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.641-201ENST00000459414 105 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RPL23AP75-201ENST00000491601 451 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNA5SP272-201ENST00000516095 111 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-426P-201ENST00000516464 97 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC008749.1-201ENST00000597650 306 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 SCARNA4-201ENST00000629045 128 ntBASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SH3RF3Q8TEJ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 MIR569-201ENST00000385228 96 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RNU1-139P-201ENST00000391307 165 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 SNORD12B-201ENST00000410433 91 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 AC010154.1-201ENST00000425857 269 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 TOMM20P4-201ENST00000427861 435 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 CR769767.1-201ENST00000436337 346 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RPS15AP7-201ENST00000439294 405 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 AC009296.1-201ENST00000443146 155 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 IFNA11P-201ENST00000446352 526 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 MRPS10P1-201ENST00000448483 130 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 UQCRHP3-201ENST00000451503 251 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RPL30P1-201ENST00000488676 339 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RNU5F-8P-201ENST00000515941 111 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 SNORD116-25-201ENST00000516517 92 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-567P-201ENST00000516746 107 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RNU7-110P-201ENST00000516891 62 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-143P-201ENST00000516942 93 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 AC093908.1-201ENST00000623125 8092 ntBASIC3.38□□□□□ -1.87
SH3RF3Q8TEJ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-1298P-201ENST00000362456 101 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-961P-201ENST00000363893 105 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.273-201ENST00000364703 102 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-449P-201ENST00000383914 107 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MIR10A-201ENST00000385043 110 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MIR514A1-201ENST00000385133 98 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RNU2-52P-201ENST00000410680 190 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AL627311.1-201ENST00000431514 115 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AL109933.2-201ENST00000452651 260 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RPL23AP3-201ENST00000453844 468 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AP000870.1-201ENST00000472927 406 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AC010409.1-201ENST00000487382 476 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 RPS27P26-201ENST00000494583 239 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 MIR5692C2-201ENST00000577959 77 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 AC005828.6-201ENST00000606610 232 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 U4.7-201ENST00000638126 106 ntBASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SH3RF3Q8TEJ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-626P-201ENST00000363354 107 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 Y_RNA.218-201ENST00000364218 104 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-879P-201ENST00000364328 108 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 RNU6-21P-201ENST00000384710 107 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AC008267.6-201ENST00000441664 139 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AL049874.1-201ENST00000489560 388 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 SUMO2P18-201ENST00000518873 252 ntBASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.36□□□□□ -1.87
SH3RF3Q8TEJ3 MIR3162-201ENST00000581818 82 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms