Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 SNRPEP8-201ENST00000442866 260 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC245102.2-201ENST00000448956 180 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 MTND1P17-201ENST00000448961 204 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AL513124.1-201ENST00000450410 614 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC087477.1-201ENST00000465747 340 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SL429P-201ENST00000479090 223 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SL489P-201ENST00000486185 223 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SL327P-201ENST00000488659 223 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RNU7-30P-201ENST00000516835 62 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC016256.1-201ENST00000547971 354 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC005668.1-201ENST00000571142 476 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AL590240.4-201ENST00000616908 390 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SL853P-201ENST00000617250 223 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC243829.7-201ENST00000633081 225 ntBASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC71LQ8N9Z2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RNU1-58P-201ENST00000362413 163 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-845P-201ENST00000362578 103 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 Y_RNA.473-201ENST00000384333 102 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP212-201ENST00000391223 107 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RPL21P111-201ENST00000418453 477 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 USP9YP30-201ENST00000430729 455 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RPS3AP52-201ENST00000435639 297 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC132942.1-201ENST00000486753 483 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 RPL23AP75-201ENST00000491601 451 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AF186996.7-201ENST00000492781 209 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 MTND5P5-201ENST00000503764 376 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 PRDX4P1-201ENST00000507189 574 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 ATP5EP1-201ENST00000510257 156 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 GNAI2P1-201ENST00000541815 315 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 DEFB122-202ENST00000569013 197 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 MIR4273-201ENST00000582824 84 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC009994.1-201ENST00000606889 253 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 AC013412.1-201ENST00000610687 192 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CCDC71LQ8N9Z2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-23P-201ENST00000363283 107 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 Y_RNA.279-201ENST00000364763 95 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-1283P-201ENST00000365314 105 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RNA5SP501-201ENST00000410990 112 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SKP284-201ENST00000411002 343 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RN7SKP192-201ENST00000411291 327 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC074085.1-201ENST00000413598 418 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC116337.1-201ENST00000509680 687 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC046134.1-201ENST00000514454 666 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC116312.1-201ENST00000606841 314 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC009318.2-201ENST00000610917 651 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC005520.5-201ENST00000613926 164 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 AC130454.1-201ENST00000622948 401 ntBASIC1.53□□□□□ -2.16
CCDC71LQ8N9Z2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CCDC71LQ8N9Z2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 MTND5P9-201ENST00000503854 1755 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.48-201ENST00000362710 103 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.184-201ENST00000363884 108 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RNA5SP126-201ENST00000365092 109 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 Y_RNA.390-201ENST00000383932 102 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 MIR487A-201ENST00000385009 80 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 SNORA12.2-201ENST00000391040 156 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 FGF7P8-201ENST00000402994 292 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AL357139.1-201ENST00000407792 426 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 MIR548K-201ENST00000408406 116 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RN7SKP32-201ENST00000410167 303 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 Z82188.1-201ENST00000436709 154 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC107399.1-201ENST00000451226 265 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC079354.2-201ENST00000453523 154 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 RNU7-14P-201ENST00000459331 62 ntBASIC1.52□□□□□ -2.17
CCDC71LQ8N9Z2 AC027575.1-201ENST00000481064 460 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms