Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HMGN2P9-201ENST00000476875 229 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL157687.1-201ENST00000554853 619 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 HMGB1P33-201ENST00000563485 527 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AL158209.2-201ENST00000619266 216 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
CCDC50Q8IVM0 ZNF72P-201ENST00000425869 1908 ntBASIC1.4□□□□□ -2.18
CCDC50Q8IVM0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC50Q8IVM0 RNU5B-2P-201ENST00000363036 113 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.132-201ENST00000363421 102 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 MIR487A-201ENST00000385009 80 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 RNU2-66P-201ENST00000410650 161 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 RNU6-325P-201ENST00000411132 105 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 MRPS10P2-201ENST00000431226 381 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 HSPE1P9-201ENST00000440046 311 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AC016717.1-201ENST00000448918 286 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 SNORA19.2-201ENST00000516013 114 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1332P-201ENST00000516666 104 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 SCOCP1-201ENST00000554676 349 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 Z99129.1-201ENST00000612510 255 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AL136221.1-201ENST00000621449 509 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 AC233981.2-201ENST00000611524 1614 ntBASIC1.4□□□□□ -2.19
CCDC50Q8IVM0 RNU6-271P-201ENST00000363858 105 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 SNORD116-1-201ENST00000384335 95 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 RNU6-780P-201ENST00000391030 104 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 SNORA17.3-201ENST00000391159 129 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 MIR450B-201ENST00000401182 78 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AL117342.1-201ENST00000404861 406 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 RNU6-648P-201ENST00000410190 107 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 RNA5SP494-201ENST00000410653 129 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AC004386.2-201ENST00000441858 148 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1208P-201ENST00000459588 107 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AC083904.1-201ENST00000487828 231 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 Y_RNA.654-201ENST00000497848 106 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AC025465.3-201ENST00000510570 311 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 RNU6-405P-201ENST00000516637 110 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 MIR3976-201ENST00000606807 139 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 FAM157A-202ENST00000615155 405 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 AC126177.8-201ENST00000618339 1015 ntBASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC50Q8IVM0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 RNU1-96P-201ENST00000364163 162 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1322P-201ENST00000364309 107 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 MIR1283-1-201ENST00000408494 87 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1068P-201ENST00000410958 103 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 C8orf59P1-201ENST00000429930 303 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AL359672.1-201ENST00000442302 409 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 MTCO3P8-201ENST00000453691 755 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AF186996.7-201ENST00000492781 209 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 RNA5SP384-201ENST00000516615 116 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AC084364.2-201ENST00000546924 395 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 MIR5006-201ENST00000583027 110 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AC005562.2-201ENST00000618264 111 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AC097520.1-201ENST00000624435 385 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 OR5AK4P-201ENST00000635912 903 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 ZNF209P-201ENST00000593450 2304 ntBASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC50Q8IVM0 AC010615.1-201ENST00000594254 1764 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RNU6-562P-201ENST00000362731 107 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RNU6-1286P-201ENST00000383871 107 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RNU6-259P-201ENST00000383999 107 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 MIR520A-201ENST00000384862 85 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 MIR514A2-201ENST00000385131 88 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 MIR514A3-201ENST00000385132 88 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RPL30P13-201ENST00000418873 348 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 UBE2V1P8-201ENST00000437166 265 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 U8.21-201ENST00000459536 136 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RPL26P26-201ENST00000480251 434 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 MTCYBP18-201ENST00000501056 747 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 RNU6-856P-201ENST00000516959 98 ntBASIC1.37□□□□□ -2.19
CCDC50Q8IVM0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms