Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 Y_RNA.167-201ENST00000363735 109 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORD116-9-201ENST00000384000 95 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORD116-3-201ENST00000384287 95 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORD116-7-201ENST00000384404 95 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORD116-5-201ENST00000384462 95 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 MIR520A-201ENST00000384862 85 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 MIR549A-201ENST00000385268 96 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNA5SP494-201ENST00000410653 129 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 MRPS10P2-201ENST00000431226 381 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 HSPE1P9-201ENST00000440046 311 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AL359672.1-201ENST00000442302 409 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 MTND3P16-201ENST00000452205 344 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1208P-201ENST00000459588 107 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 HMGN1P13-201ENST00000505795 138 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AC092436.3-201ENST00000511788 257 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-835P-201ENST00000516974 104 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AP005136.1-201ENST00000579765 429 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 MIR4422-201ENST00000581938 83 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 RMST_3.1-201ENST00000611651 109 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 AC005562.2-201ENST00000618264 111 ntBASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUDCD3Q8IVD9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 RNU1-96P-201ENST00000364163 162 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1286P-201ENST00000383871 107 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 MIR1283-1-201ENST00000408494 87 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 MTCO1P21-201ENST00000416634 589 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 ARL5AP1-201ENST00000418991 388 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC098826.2-201ENST00000452011 651 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 HMGN2P9-201ENST00000476875 229 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-405P-201ENST00000516637 110 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AL158209.2-201ENST00000619266 216 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 MIR7843-201ENST00000622274 79 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 ZNF72P-201ENST00000425869 1908 ntBASIC1.32□□□□□ -2.2
NUDCD3Q8IVD9 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-968P-201ENST00000384076 107 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1042P-201ENST00000384204 107 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR514A2-201ENST00000385131 88 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR514A3-201ENST00000385132 88 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR548B-201ENST00000385247 97 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR300-201ENST00000401138 83 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AL117342.1-201ENST00000404861 406 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-648P-201ENST00000410190 107 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-325P-201ENST00000411132 105 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RPS26P42-201ENST00000413485 326 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 C8orf59P1-201ENST00000429930 303 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC004386.2-201ENST00000441858 148 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC108210.2-201ENST00000503681 201 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC091885.1-201ENST00000506658 268 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC067942.3-201ENST00000512025 362 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC084364.2-201ENST00000546924 395 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR5006-201ENST00000583027 110 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MIR3976-201ENST00000606807 139 ntBASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.31□□□□□ -2.2
NUDCD3Q8IVD9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1085P-201ENST00000363576 107 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-1019P-201ENST00000364424 107 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-259P-201ENST00000383999 107 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 Y_RNA.481-201ENST00000384373 102 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 CALM2P3-201ENST00000400429 449 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU6-174P-201ENST00000410406 106 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RNU2-66P-201ENST00000410650 161 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC004866.1-201ENST00000411748 78 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.3□□□□□ -2.2
NUDCD3Q8IVD9 RPL36AP21-201ENST00000490372 323 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms