Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SNORD111.1-201ENST00000516421 86 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 uc_338.34-201ENST00000617467 174 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 AC015726.2-201ENST00000620112 122 ntBASIC-0.41□□□□□ -2.48
CCDC58Q4VC31 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNU6-545P-201ENST00000362681 104 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 MIR300-201ENST00000401138 83 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNU6-994P-201ENST00000410507 111 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 AC245047.3-201ENST00000429428 127 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 AC244670.1-201ENST00000436879 112 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 AC093019.1-201ENST00000443135 252 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 AC116347.2-201ENST00000514912 523 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 LRRC6P1-201ENST00000532188 885 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 AL162424.1-201ENST00000602325 221 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.42□□□□□ -2.48
CCDC58Q4VC31 RNA5SP128-201ENST00000365305 116 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 MIR193B-201ENST00000384907 83 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 MIR518E-201ENST00000385252 88 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 SNORA40.8-201ENST00000411034 126 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 RNU6-57P-201ENST00000411348 103 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 HSFY7P-201ENST00000432672 318 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 HSFY8P-201ENST00000437934 318 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 AC023157.2-201ENST00000540596 141 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 RPL23AP91-201ENST00000569211 455 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 AC090517.1-201ENST00000569307 266 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 RN7SL793P-201ENST00000583259 296 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 AC146944.4-201ENST00000602697 718 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 MIR6079-201ENST00000635807 62 ntBASIC-0.43□□□□□ -2.48
CCDC58Q4VC31 MIR18A-201ENST00000362310 71 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 SNORD114-26-201ENST00000363543 72 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 MRPL42P3-201ENST00000401492 326 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 MIR1287-201ENST00000408492 90 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AL049829.1-201ENST00000465411 156 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AC112206.4-201ENST00000515142 405 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AC074133.1-201ENST00000515696 183 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 MIR3912-201ENST00000577566 105 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 MIR8084-201ENST00000614105 89 ntBASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.44□□□□□ -2.48
CCDC58Q4VC31 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 RNU6-43P-201ENST00000384302 107 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 RNU6-378P-201ENST00000384324 107 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 RNY1P4-201ENST00000384595 115 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 MIR1283-1-201ENST00000408494 87 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 AC112693.2-201ENST00000556538 232 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 AC099785.1-201ENST00000605697 437 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 U6.108-201ENST00000637764 58 ntBASIC-0.45□□□□□ -2.48
CCDC58Q4VC31 AP000568.1-201ENST00000282964 442 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 RNU6-105P-201ENST00000363909 104 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 MIR644A-201ENST00000385262 94 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 AL158053.1-201ENST00000441503 453 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 AC243964.1-201ENST00000441814 261 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 ELOCP24-201ENST00000456370 334 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 SNRPGP7-201ENST00000469016 106 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 RPS3AP17-201ENST00000472594 777 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 RNU6-948P-201ENST00000516374 107 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 RNU1-142P-201ENST00000516682 145 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 AF235103.2-201ENST00000525753 346 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 MIR3124-201ENST00000582636 67 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 MIR4753-201ENST00000585119 83 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 DEFB131E-202ENST00000602581 683 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 OR4H6P-202ENST00000603819 340 ntBASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
CCDC58Q4VC31 MIR214-201ENST00000385214 110 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 SNORD111-201ENST00000408139 94 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 ELOCP17-201ENST00000414751 326 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 CDK8P2-201ENST00000415020 547 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 AC010975.2-201ENST00000427781 588 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 RPL23AP30-201ENST00000432419 501 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 SEPT7P4-201ENST00000437076 306 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 MTCO1P27-201ENST00000448269 226 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 SNORA40.12-201ENST00000516329 111 ntBASIC-0.47□□□□□ -2.48
CCDC58Q4VC31 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms