Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
CALD1Q05682 MIR340-201ENST00000362125 95 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 Y_RNA.9-201ENST00000362354 101 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 RNU1-76P-201ENST00000362903 159 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 Y_RNA.151-201ENST00000363566 112 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 SNORA67.5-201ENST00000391036 107 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 RNA5SP494-201ENST00000410653 129 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 RN7SKP101-201ENST00000411376 320 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 MTCO1P21-201ENST00000416634 589 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.11□□□□□ -2.07
CALD1Q05682 Z82205.1-201ENST00000428456 297 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.11□□□□□ -2.07
CALD1Q05682 AL035666.1-201ENST00000446195 348 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AF186996.7-201ENST00000492781 209 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AC096745.1-201ENST00000509945 370 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 RNVU1-2-201ENST00000516326 135 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.11□□□□□ -2.07
CALD1Q05682 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.11□□□□□ -2.07
CALD1Q05682 AC016256.1-201ENST00000547971 354 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.11□□□□□ -2.07
CALD1Q05682 MIR8076-201ENST00000611401 83 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AC090617.10-201ENST00000624308 134 ntBASIC2.11□□□□□ -2.07
CALD1Q05682 AC006026.1-201ENST00000444025 1803 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 RNA5SP363-201ENST00000365072 115 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 RNU6-128P-201ENST00000383976 107 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 Y_RNA.450-201ENST00000384198 113 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 Y_RNA.530-201ENST00000384587 101 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 SNRPEP10-201ENST00000420249 274 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 AC130509.1-201ENST00000464158 433 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 FAM206BP-201ENST00000510179 541 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 AP005639.2-201ENST00000527592 928 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 AC016727.2-201ENST00000603988 621 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 AL133215.3-201ENST00000609801 448 ntBASIC2.1□□□□□ -2.07
CALD1Q05682 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CALD1Q05682 RNY4P14-201ENST00000363656 96 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 RNU6-1215P-201ENST00000384441 102 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 RNU6-1026P-201ENST00000384465 108 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 RNU6-790P-201ENST00000384479 105 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 RNU6-95P-201ENST00000384697 107 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 SNORD13-201ENST00000459299 104 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 RPS23P5-201ENST00000495419 428 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
CALD1Q05682 AC087441.2-201ENST00000529141 262 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.09□□□□□ -2.07
CALD1Q05682 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CALD1Q05682 AL138726.1-201ENST00000614873 333 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 AC022513.1-201ENST00000624512 117 ntBASIC2.09□□□□□ -2.07
CALD1Q05682 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CALD1Q05682 Y_RNA.89-201ENST00000363031 102 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 SNORD31B-201ENST00000364977 69 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CALD1Q05682 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CALD1Q05682 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.08□□□□□ -2.08
CALD1Q05682 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
CALD1Q05682 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CALD1Q05682 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.08□□□□□ -2.08
CALD1Q05682 MTCYBP18-201ENST00000501056 747 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 Y_RNA.655-201ENST00000515919 96 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 RNU6-256P-201ENST00000516747 97 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.08□□□□□ -2.08
CALD1Q05682 FGF7P1-201ENST00000582820 288 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 AC023043.2-201ENST00000589678 1026 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
CALD1Q05682 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.08□□□□□ -2.08
CALD1Q05682 AC233981.2-201ENST00000611524 1614 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 RNU6-545P-201ENST00000362681 104 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 Y_RNA.414-201ENST00000384011 101 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CALD1Q05682 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.07□□□□□ -2.08
CALD1Q05682 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.07□□□□□ -2.08
CALD1Q05682 MTND1P11-201ENST00000456661 876 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AC016925.1-201ENST00000458303 298 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 TRBVA-201ENST00000498804 316 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AC091435.1-201ENST00000505442 584 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.07□□□□□ -2.08
CALD1Q05682 RNU6-970P-201ENST00000516312 107 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 RNU6-273P-201ENST00000516937 96 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.07□□□□□ -2.08
CALD1Q05682 MIR3672-201ENST00000584290 82 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.07□□□□□ -2.08
CALD1Q05682 BX248123.2-201ENST00000606318 124 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 AC100810.6-201ENST00000638068 285 ntBASIC2.07□□□□□ -2.08
CALD1Q05682 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.07□□□□□ -2.08
CALD1Q05682 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CALD1Q05682 RNU6-534P-201ENST00000364877 106 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 RNU6-877P-201ENST00000383868 107 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 MIR487A-201ENST00000385009 80 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 RNU6-482P-201ENST00000391068 107 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 RNA5SP212-201ENST00000391223 107 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 SNORD115-47-201ENST00000391226 86 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 EIF4EP2-201ENST00000422816 654 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 AL513185.2-201ENST00000425543 193 ntBASIC2.06□□□□□ -2.08
CALD1Q05682 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.06□□□□□ -2.08
CALD1Q05682 RNU1-131P-201ENST00000458943 161 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms