Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RNU6-1328P-201ENST00000410938 106 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RPL23AP36-201ENST00000413895 458 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.14□□□□□ -1.91
IRF9Q00978 MICF-203ENST00000432679 129 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RNU2-44P-201ENST00000516795 194 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 RNU2-31P-201ENST00000516954 155 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
IRF9Q00978 AC055872.1-201ENST00000570978 278 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 AC022441.3-201ENST00000605737 136 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 AC006001.4-201ENST00000622243 395 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 IGHVIII-44-202ENST00000636235 289 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 MIR7515-201ENST00000637837 67 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.14□□□□□ -1.91
IRF9Q00978 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IRF9Q00978 AC010329.5-201ENST00000623497 2174 ntBASIC3.14□□□□□ -1.91
IRF9Q00978 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
IRF9Q00978 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
IRF9Q00978 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
IRF9Q00978 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
IRF9Q00978 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.13□□□□□ -1.91
IRF9Q00978 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IRF9Q00978 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IRF9Q00978 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
IRF9Q00978 RNU1-72P-201ENST00000362976 153 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 RNA5SP50-201ENST00000363731 107 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 RNU6-326P-201ENST00000365480 107 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IRF9Q00978 Y_RNA.569-201ENST00000384749 103 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 MIR183-201ENST00000384958 110 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 SNORA11.1-201ENST00000408133 129 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.13□□□□□ -1.91
IRF9Q00978 Z98949.2-201ENST00000440996 144 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.13□□□□□ -1.91
IRF9Q00978 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.13□□□□□ -1.91
IRF9Q00978 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.13□□□□□ -1.91
IRF9Q00978 RPL17P51-201ENST00000605218 238 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 MIR7157-201ENST00000635801 60 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 AC068205.3-201ENST00000636385 468 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
IRF9Q00978 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
IRF9Q00978 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
IRF9Q00978 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
IRF9Q00978 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
IRF9Q00978 AC093010.3-201ENST00000570269 15214 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
IRF9Q00978 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 Y_RNA.277-201ENST00000364754 102 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 RNU6-1310P-201ENST00000384153 107 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 MT-TR-201ENST00000387439 65 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 Y_RNA.597-201ENST00000410463 100 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 RN7SKP58-201ENST00000411010 305 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 RPL30P4-201ENST00000429309 333 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AC005042.3-201ENST00000453230 174 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 RPL23AP3-201ENST00000453844 468 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AL139109.1-201ENST00000455491 297 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 RNU1-117P-201ENST00000517041 158 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
IRF9Q00978 AC008749.1-201ENST00000597650 306 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 BX284668.6-201ENST00000606899 438 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AL442067.1-201ENST00000613261 223 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AC004467.1-201ENST00000615678 330 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AL590240.4-201ENST00000616908 390 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 AC091932.3-201ENST00000624223 323 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 MIR3674-201ENST00000636576 68 ntBASIC3.12□□□□□ -1.91
IRF9Q00978 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.12□□□□□ -1.91
IRF9Q00978 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
IRF9Q00978 MIR410-201ENST00000362222 80 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 RNU6-338P-201ENST00000383888 105 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 RNU6-1264P-201ENST00000383891 107 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 RNA5SP504-201ENST00000410676 117 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.11□□□□□ -1.91
IRF9Q00978 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.11□□□□□ -1.91
IRF9Q00978 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.11□□□□□ -1.91
IRF9Q00978 POLR2KP2-201ENST00000438155 177 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 SCARNA3-201ENST00000517097 143 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AP002001.1-203ENST00000534002 267 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AC010620.2-201ENST00000600135 313 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AL713866.2-201ENST00000603579 219 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
IRF9Q00978 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.11□□□□□ -1.91
IRF9Q00978 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IRF9Q00978 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.11□□□□□ -1.91
IRF9Q00978 AC110774.1-201ENST00000623567 2018 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
IRF9Q00978 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
IRF9Q00978 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
IRF9Q00978 SNORA25.1-201ENST00000362326 128 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 Y_RNA.44-201ENST00000362676 108 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 Y_RNA.101-201ENST00000363154 102 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 SNORA68.1-201ENST00000364537 132 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 SNORD87-201ENST00000364849 89 ntBASIC3.1□□□□□ -1.91
IRF9Q00978 Y_RNA.446-201ENST00000384178 104 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms