Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC008536.2-201ENST00000607284 349 ntBASIC1.27□□□□□ -2.21
ACLYP53396 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.27□□□□□ -2.21
ACLYP53396 AC072046.2-201ENST00000618366 268 ntBASIC1.27□□□□□ -2.21
ACLYP53396 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.27□□□□□ -2.21
ACLYP53396 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ACLYP53396 RNU6-1120P-201ENST00000362988 108 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RNU1-96P-201ENST00000364163 162 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
ACLYP53396 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RNU6-517P-201ENST00000384362 110 ntBASIC1.26□□□□□ -2.21
ACLYP53396 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.26□□□□□ -2.21
ACLYP53396 MTCO2P11-201ENST00000431069 680 ntBASIC1.26□□□□□ -2.21
ACLYP53396 AC132479.1-201ENST00000449160 144 ntBASIC1.26□□□□□ -2.21
ACLYP53396 MTND1P27-201ENST00000451117 902 ntBASIC1.26□□□□□ -2.21
ACLYP53396 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.26□□□□□ -2.21
ACLYP53396 AC092991.1-201ENST00000477176 376 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RPS23P4-201ENST00000487908 423 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RNA5SP481-201ENST00000516814 122 ntBASIC1.26□□□□□ -2.21
ACLYP53396 RNU6-856P-201ENST00000516959 98 ntBASIC1.26□□□□□ -2.21
ACLYP53396 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.26□□□□□ -2.21
ACLYP53396 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.26□□□□□ -2.21
ACLYP53396 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.26□□□□□ -2.21
ACLYP53396 SNORA59B-202ENST00000578183 701 ntBASIC1.26□□□□□ -2.21
ACLYP53396 AC109347.2-201ENST00000610220 349 ntBASIC1.26□□□□□ -2.21
ACLYP53396 MIR6779-201ENST00000617283 64 ntBASIC1.26□□□□□ -2.21
ACLYP53396 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.26□□□□□ -2.21
ACLYP53396 AC091931.1-201ENST00000623488 728 ntBASIC1.26□□□□□ -2.21
ACLYP53396 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.26□□□□□ -2.21
ACLYP53396 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.26□□□□□ -2.21
ACLYP53396 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
ACLYP53396 Y_RNA.132-201ENST00000363421 102 ntBASIC1.25□□□□□ -2.21
ACLYP53396 SNORA63D-201ENST00000364359 132 ntBASIC1.25□□□□□ -2.21
ACLYP53396 SNORD1A-201ENST00000364968 72 ntBASIC1.25□□□□□ -2.21
ACLYP53396 MTATP6P18-201ENST00000417994 673 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.25□□□□□ -2.21
ACLYP53396 RPS27P16-201ENST00000425758 201 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AL358934.1-201ENST00000432346 324 ntBASIC1.25□□□□□ -2.21
ACLYP53396 MTND4LP16-201ENST00000440828 295 ntBASIC1.25□□□□□ -2.21
ACLYP53396 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.25□□□□□ -2.21
ACLYP53396 MTCO2P3-201ENST00000442543 421 ntBASIC1.25□□□□□ -2.21
ACLYP53396 HMGN2P9-201ENST00000476875 229 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AC108078.1-201ENST00000508073 725 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.25□□□□□ -2.21
ACLYP53396 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.25□□□□□ -2.21
ACLYP53396 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.25□□□□□ -2.21
ACLYP53396 HIF1AP1-201ENST00000553642 175 ntBASIC1.25□□□□□ -2.21
ACLYP53396 MTATP6P24-201ENST00000576835 677 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AC016727.2-201ENST00000603988 621 ntBASIC1.25□□□□□ -2.21
ACLYP53396 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
ACLYP53396 MIR3976-201ENST00000606807 139 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AC091304.6-201ENST00000619761 202 ntBASIC1.25□□□□□ -2.21
ACLYP53396 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
ACLYP53396 RNU6-877P-201ENST00000383868 107 ntBASIC1.24□□□□□ -2.21
ACLYP53396 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.24□□□□□ -2.21
ACLYP53396 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
ACLYP53396 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.24□□□□□ -2.21
ACLYP53396 AC027119.1-201ENST00000440877 241 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.24□□□□□ -2.21
ACLYP53396 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.24□□□□□ -2.21
ACLYP53396 RNU6-430P-201ENST00000517078 107 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.24□□□□□ -2.21
ACLYP53396 MIR4760-201ENST00000585040 80 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC087683.2-201ENST00000611384 326 ntBASIC1.24□□□□□ -2.21
ACLYP53396 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC095038.3-201ENST00000634439 195 ntBASIC1.24□□□□□ -2.21
ACLYP53396 AC009541.1-201ENST00000438279 2662 ntBASIC1.23□□□□□ -2.21
ACLYP53396 RNU6-1106P-201ENST00000390845 107 ntBASIC1.23□□□□□ -2.21
ACLYP53396 RNU6-1093P-201ENST00000391194 107 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AL117342.1-201ENST00000404861 406 ntBASIC1.23□□□□□ -2.21
ACLYP53396 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.23□□□□□ -2.21
ACLYP53396 SDAD1P3-201ENST00000427380 333 ntBASIC1.23□□□□□ -2.21
ACLYP53396 MTCO3P29-201ENST00000432119 779 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.23□□□□□ -2.21
ACLYP53396 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC069257.2-201ENST00000441819 155 ntBASIC1.23□□□□□ -2.21
ACLYP53396 RNU7-180P-201ENST00000459240 63 ntBASIC1.23□□□□□ -2.21
ACLYP53396 RNU7-138P-201ENST00000459479 64 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC010486.2-201ENST00000505572 483 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
ACLYP53396 RNU6-1041P-201ENST00000516254 102 ntBASIC1.23□□□□□ -2.21
ACLYP53396 DEFB131C-201ENST00000528817 165 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC090115.3-201ENST00000553218 849 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC005668.1-201ENST00000571142 476 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AL391840.1-201ENST00000571144 367 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AC040904.1-201ENST00000590850 223 ntBASIC1.23□□□□□ -2.21
ACLYP53396 AL353149.1-201ENST00000610667 244 ntBASIC1.23□□□□□ -2.21
ACLYP53396 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.23□□□□□ -2.21
ACLYP53396 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.23□□□□□ -2.21
ACLYP53396 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ACLYP53396 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
ACLYP53396 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
ACLYP53396 RNU6-545P-201ENST00000362681 104 ntBASIC1.22□□□□□ -2.21
ACLYP53396 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
ACLYP53396 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
ACLYP53396 Y_RNA.159-201ENST00000363674 87 ntBASIC1.22□□□□□ -2.21
ACLYP53396 SNORD73A-201ENST00000386062 65 ntBASIC1.22□□□□□ -2.21
ACLYP53396 MIR300-201ENST00000401138 83 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms