Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SNRPGP9-201ENST00000456025 225 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0□□□□□ -2.41
GTF2A1P52655 AC025465.4-201ENST00000513422 638 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNA5SP436-201ENST00000516020 115 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU6-948P-201ENST00000516374 107 ntBASIC0□□□□□ -2.41
GTF2A1P52655 RNU7-51P-201ENST00000516560 62 ntBASIC0□□□□□ -2.41
GTF2A1P52655 MIR4753-201ENST00000585119 83 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AC004832.4-201ENST00000608952 331 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AL096861.1-201ENST00000610899 123 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AC006001.4-201ENST00000622243 395 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AL163152.1-201ENST00000642001 374 ntBASIC0□□□□□ -2.41
GTF2A1P52655 AC027514.1-201ENST00000588561 1603 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU6-433P-201ENST00000363216 104 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 SNORD114-23-201ENST00000363536 72 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU6-723P-201ENST00000383973 107 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU6-975P-201ENST00000384296 105 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU6-177P-201ENST00000411257 104 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC114491.1-201ENST00000416095 246 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 MTCYBP10-201ENST00000424905 650 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC245047.3-201ENST00000429428 127 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 AL162725.1-201ENST00000435405 301 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 RNU6-377P-201ENST00000515965 102 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC109810.1-201ENST00000534066 224 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC087894.1-201ENST00000538359 518 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC023827.1-201ENST00000569247 97 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 MTND4LP25-201ENST00000570218 163 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 MTND1P15-201ENST00000579262 949 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC004223.2-201ENST00000590309 544 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC146944.4-201ENST00000602697 718 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AL031775.1-201ENST00000607014 887 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.01□□□□□ -2.41
GTF2A1P52655 AL356596.1-201ENST00000624230 379 ntBASIC-0.01□□□□□ -2.41
GTF2A1P52655 AC073343.1-201ENST00000328239 651 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 SNORA2.2-201ENST00000365473 135 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 MIR549A-201ENST00000385268 96 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
GTF2A1P52655 MIR208B-201ENST00000401172 77 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.02□□□□□ -2.41
GTF2A1P52655 AL353777.1-201ENST00000425552 326 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC005002.2-201ENST00000438228 269 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC104332.1-201ENST00000440471 797 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.02□□□□□ -2.41
GTF2A1P52655 RBBP4P6-201ENST00000508098 202 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC022868.1-201ENST00000517767 391 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 MIR5692A1-201ENST00000580523 69 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC008507.2-201ENST00000588402 1176 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AP001542.1-201ENST00000591314 200 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 Z99497.2-201ENST00000603634 310 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 SNRPGP20-201ENST00000604477 205 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.02□□□□□ -2.41
GTF2A1P52655 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AC006386.1-201ENST00000619436 415 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 AL157786.1-207ENST00000627771 695 ntBASIC-0.02□□□□□ -2.41
GTF2A1P52655 RNA5SP432-201ENST00000362480 116 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 RNA5SP219-201ENST00000390940 113 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 MRPL42P3-201ENST00000401492 326 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 RNA5SP504-201ENST00000410676 117 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AL356583.2-201ENST00000426536 280 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 SNAP23P1-201ENST00000433229 246 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 MTND1P12-201ENST00000455231 147 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AC016632.1-201ENST00000503994 196 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 SNORA62.5-201ENST00000516634 120 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 RNU6-567P-201ENST00000516746 107 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.03□□□□□ -2.41
GTF2A1P52655 AL391840.1-201ENST00000571144 367 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AC112191.3-201ENST00000604371 277 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 RAC1P9-201ENST00000604990 392 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AL139022.2-201ENST00000606934 443 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AC064807.4-201ENST00000607201 407 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AC007742.2-201ENST00000618226 398 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 AL512427.1-201ENST00000618593 349 ntBASIC-0.03□□□□□ -2.41
GTF2A1P52655 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.04□□□□□ -2.42
GTF2A1P52655 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
GTF2A1P52655 AP000568.1-201ENST00000282964 442 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNY4P24-201ENST00000362735 96 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-428P-201ENST00000362942 107 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-25P-201ENST00000383873 107 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-48P-201ENST00000384161 107 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 SNORA36A-201ENST00000384221 132 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-15P-201ENST00000384534 107 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-29P-201ENST00000384637 107 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC016909.1-201ENST00000415916 166 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AL596276.1-201ENST00000434465 418 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.04□□□□□ -2.42
GTF2A1P52655 MTCO1P19-201ENST00000443487 500 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms