Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC140059.1-201ENST00000489238 361 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.46□□□□□ -2.02
CLCN3P51790 RNU6-567P-201ENST00000516746 107 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 RNU6-988P-201ENST00000519081 107 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 IGKV3-31-201ENST00000523109 329 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.46□□□□□ -2.02
CLCN3P51790 MIR4680-201ENST00000580906 66 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.46□□□□□ -2.02
CLCN3P51790 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 U4atac.1-201ENST00000618345 95 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 SNORD98-201ENST00000636377 67 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
CLCN3P51790 ZNF299P-201ENST00000406845 1804 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 MTND5P9-201ENST00000503854 1755 ntBASIC2.46□□□□□ -2.02
CLCN3P51790 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CLCN3P51790 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CLCN3P51790 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CLCN3P51790 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
CLCN3P51790 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CLCN3P51790 Y_RNA.48-201ENST00000362710 103 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 Y_RNA.145-201ENST00000363527 102 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 Y_RNA.158-201ENST00000363651 101 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 U3.13-201ENST00000364804 214 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 RNU1-109P-201ENST00000383960 147 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 MIR521-1-201ENST00000384902 87 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CLCN3P51790 Y_RNA.645-201ENST00000391229 102 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.45□□□□□ -2.02
CLCN3P51790 CHEK2P4-201ENST00000450340 246 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.45□□□□□ -2.02
CLCN3P51790 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.45□□□□□ -2.02
CLCN3P51790 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 RPL30P10-201ENST00000488148 337 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 RNU4-77P-201ENST00000516692 156 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 SNORA48.11-201ENST00000517015 89 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AC007375.1-201ENST00000554513 578 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AC104984.5-201ENST00000586878 94 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.45□□□□□ -2.02
CLCN3P51790 AL034555.1-201ENST00000604816 211 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AL670379.2-201ENST00000604983 252 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AL138963.2-201ENST00000605137 226 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.45□□□□□ -2.02
CLCN3P51790 SNORA43.4-201ENST00000629559 138 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
CLCN3P51790 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
CLCN3P51790 Y_RNA.80-201ENST00000362996 102 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 RNY1P16-201ENST00000363063 111 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AC117470.1-201ENST00000381974 330 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 RNU6-639P-201ENST00000384074 107 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 MRPL42P3-201ENST00000401492 326 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCN3P51790 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCN3P51790 AC099799.1-201ENST00000439809 192 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCN3P51790 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCN3P51790 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCN3P51790 snoU13.15-201ENST00000459407 104 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCN3P51790 AC091874.1-201ENST00000511402 339 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 SNORA25.10-201ENST00000515926 124 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 RNU6-475P-201ENST00000516073 104 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 RNU6-586P-201ENST00000517265 104 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCN3P51790 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.44□□□□□ -2.02
CLCN3P51790 AL162730.1-201ENST00000605734 292 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 SNORD58B-201ENST00000607313 66 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AC083806.3-201ENST00000614016 455 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 HMGB1P24-202ENST00000615653 685 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCN3P51790 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCN3P51790 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.44□□□□□ -2.02
CLCN3P51790 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 AL450472.1-202ENST00000637286 180 ntBASIC2.44□□□□□ -2.02
CLCN3P51790 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.44□□□□□ -2.02
CLCN3P51790 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLCN3P51790 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AL079342.1-201ENST00000401460 267 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AL023284.1-201ENST00000403956 276 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC113618.1-201ENST00000416747 285 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AL590135.1-201ENST00000422215 156 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC019205.3-201ENST00000424573 156 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AL353997.1-201ENST00000432936 108 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.43□□□□□ -2.02
CLCN3P51790 GPM6BP3-201ENST00000442797 145 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC016700.2-201ENST00000446011 156 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.43□□□□□ -2.02
CLCN3P51790 AL353752.1-201ENST00000454946 260 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC112492.4-201ENST00000456549 352 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC090515.1-201ENST00000465295 476 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 SNRPGP7-201ENST00000469016 106 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC015911.1-201ENST00000495111 156 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 CKS1BP2-201ENST00000497342 240 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 SNORD116.3-201ENST00000517176 78 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 MIR4273-201ENST00000582824 84 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 AC136443.5-201ENST00000603741 370 ntBASIC2.43□□□□□ -2.02
CLCN3P51790 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms