Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF144AP50876 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF144AP50876 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF144AP50876 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF144AP50876 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RNF144AP50876 RNU6-756P-201ENST00000383997 107 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 SNORD72-201ENST00000390994 80 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 MIR300-201ENST00000401138 83 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 MIR1283-1-201ENST00000408494 87 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 RNA5SP127-201ENST00000411051 133 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 Y_RNA.625-201ENST00000411256 107 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF144AP50876 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF144AP50876 HMGN2P32-201ENST00000444648 269 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 RN7SL98P-201ENST00000462271 300 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 AC010618.1-201ENST00000469924 477 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF144AP50876 TVP23BP1-201ENST00000557500 617 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF144AP50876 AL929325.1-201ENST00000603096 117 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 AC011944.2-201ENST00000624440 683 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 ZNF962P-201ENST00000443465 3140 ntBASIC3.95□□□□□ -1.78
RNF144AP50876 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
RNF144AP50876 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF144AP50876 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF144AP50876 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RNF144AP50876 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF144AP50876 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
RNF144AP50876 RNU6-766P-201ENST00000362478 107 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 Y_RNA.528-201ENST00000384575 108 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 MIR624-201ENST00000385217 97 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNF144AP50876 MIR891A-201ENST00000401237 79 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 RNU7-14P-201ENST00000459331 62 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 RPL36AP48-201ENST00000485521 314 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 RNA5SP309-201ENST00000516670 106 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 IGKV1-22-201ENST00000524313 326 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 PRELID2P1-201ENST00000552837 301 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 AC015720.1-201ENST00000565251 277 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 AC007012.1-201ENST00000567192 175 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 uc_338.13-201ENST00000618243 179 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF144AP50876 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RNF144AP50876 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF144AP50876 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF144AP50876 AL672296.1-201ENST00000427780 2158 ntBASIC3.94□□□□□ -1.78
RNF144AP50876 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF144AP50876 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF144AP50876 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RNF144AP50876 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF144AP50876 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RNF144AP50876 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF144AP50876 RNU6-640P-201ENST00000363693 105 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 Y_RNA.203-201ENST00000364106 102 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 SNORD32B-201ENST00000364460 84 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 RNU6-1131P-201ENST00000364955 107 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RNF144AP50876 Y_RNA.388-201ENST00000383919 113 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 SNORD12C-201ENST00000386307 89 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 RNU6-57P-201ENST00000411348 103 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 RNU6-221P-201ENST00000459541 99 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 AC010531.2-201ENST00000465012 153 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 RN7SL585P-201ENST00000470538 280 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 AC107934.2-201ENST00000518653 310 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.93□□□□□ -1.78
RNF144AP50876 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF144AP50876 Pinc.1-201ENST00000616452 154 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 AP001318.4-201ENST00000616637 121 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 AC140479.6-201ENST00000633535 357 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 AL136360.1-201ENST00000503377 1900 ntBASIC3.93□□□□□ -1.78
RNF144AP50876 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF144AP50876 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RNF144AP50876 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF144AP50876 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RNF144AP50876 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF144AP50876 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF144AP50876 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF144AP50876 Y_RNA.85-201ENST00000363014 111 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 SNORA51.5-201ENST00000384126 131 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 MIR1302-5-201ENST00000408164 150 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.92□□□□□ -1.78
RNF144AP50876 RPS29P17-201ENST00000430795 166 ntBASIC3.92□□□□□ -1.78
RNF144AP50876 AF228730.3-201ENST00000436691 102 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms