Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-546P-201ENST00000383991 107 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 SNORA29-201ENST00000384183 140 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 RNU1-52P-201ENST00000384190 164 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 Y_RNA.597-201ENST00000410463 100 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC107399.1-201ENST00000451226 265 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD4P46934 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC132942.1-201ENST00000486753 483 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD4P46934 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD4P46934 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.99□□□□□ -2.09
NEDD4P46934 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 CBX3P4-201ENST00000538909 354 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD4P46934 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.99□□□□□ -2.09
NEDD4P46934 MIR4255-201ENST00000579351 72 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 MIR3618-201ENST00000580330 88 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 PCGEM1.1-201ENST00000613431 131 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 MIR6128-201ENST00000615528 109 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC063943.3-201ENST00000615562 356 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AC137590.2-201ENST00000619709 240 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 AL133216.2-202ENST00000634512 349 ntBASIC1.99□□□□□ -2.09
NEDD4P46934 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 RNU6-968P-201ENST00000384076 107 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 U3.40-201ENST00000408706 208 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 RNA5SP201-201ENST00000410316 124 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 RNU2-32P-201ENST00000411193 191 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 HMGB1P18-201ENST00000438801 619 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 HMGN1P12-201ENST00000499125 195 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.98□□□□□ -2.09
NEDD4P46934 AC021146.2-201ENST00000504736 556 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 Y_RNA.691-201ENST00000516611 103 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 AC022616.8-201ENST00000533569 253 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
NEDD4P46934 MIR3683-201ENST00000580847 82 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 UBE2V2P2-201ENST00000587677 504 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 RPL17P51-201ENST00000605218 238 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 AL355073.2-201ENST00000612106 557 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
NEDD4P46934 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
NEDD4P46934 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NEDD4P46934 RNU6-1159P-201ENST00000362933 107 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 RNU1-23P-201ENST00000363361 144 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 U3.9-201ENST00000363823 204 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 SNORD32B-201ENST00000364460 84 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 RNA5SP190-201ENST00000365222 118 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 RNU6-611P-201ENST00000384276 104 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 Y_RNA.482-201ENST00000384377 111 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 MIR548F5-201ENST00000408421 86 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 RPS26P42-201ENST00000413485 326 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 AL139109.1-201ENST00000455491 297 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 SNORD5.1-201ENST00000458800 75 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
NEDD4P46934 EIF4A1P12-201ENST00000551910 141 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 AC009127.3-201ENST00000570531 403 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 MIR4273-201ENST00000582824 84 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 AL353997.5-201ENST00000618886 171 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
NEDD4P46934 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.97□□□□□ -2.09
NEDD4P46934 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NEDD4P46934 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
NEDD4P46934 SNORD50.1-201ENST00000362987 71 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 SNORA72.1-201ENST00000363485 129 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 RNU6-944P-201ENST00000364023 107 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 SNORD81.2-201ENST00000365153 76 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 SNORA36A-201ENST00000384221 132 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 RNU6-306P-201ENST00000384617 107 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NEDD4P46934 SNORA46.1-201ENST00000391069 153 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 RNA5SP494-201ENST00000410653 129 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 RPL37P10-201ENST00000412884 288 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 PDCL2P1-201ENST00000419302 352 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 Z82205.1-201ENST00000428456 297 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.96□□□□□ -2.1
NEDD4P46934 AC018868.1-201ENST00000491307 315 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.96□□□□□ -2.1
NEDD4P46934 RNU6-1016P-201ENST00000516689 94 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 NDUFA5P6-201ENST00000542110 379 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.96□□□□□ -2.1
NEDD4P46934 AC024614.2-201ENST00000577584 372 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 AC245884.12-201ENST00000615364 59 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 AC099654.5-201ENST00000636479 350 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 MTND5P9-201ENST00000503854 1755 ntBASIC1.96□□□□□ -2.1
NEDD4P46934 MTND4P12-201ENST00000498999 1377 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 RNU1-148P-201ENST00000384472 162 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 RNA5SP213-201ENST00000391031 106 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 RNU6-174P-201ENST00000410406 106 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 RPS3AP52-201ENST00000435639 297 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.95□□□□□ -2.1
NEDD4P46934 MTND4P18-201ENST00000447010 465 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC079354.2-201ENST00000453523 154 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
NEDD4P46934 AC068781.1-201ENST00000488231 618 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms