Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 DAP3P1-201ENST00000441522 278 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.98□□□□□ -2.09
ERCC2P18074 AC079354.2-201ENST00000453523 154 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 AC016925.1-201ENST00000458303 298 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.98□□□□□ -2.09
ERCC2P18074 RNU6-1088P-201ENST00000516850 104 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 MTND4LP26-201ENST00000518144 282 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.98□□□□□ -2.09
ERCC2P18074 AP003465.2-201ENST00000602571 373 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 AC122108.2-201ENST00000611946 526 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 AC092794.1-201ENST00000612734 582 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 AC005562.2-201ENST00000618264 111 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 U1.36-201ENST00000620684 176 ntBASIC1.98□□□□□ -2.09
ERCC2P18074 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
ERCC2P18074 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.98□□□□□ -2.09
ERCC2P18074 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
ERCC2P18074 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
ERCC2P18074 RNU6-545P-201ENST00000362681 104 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 Y_RNA.86-201ENST00000363020 111 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 MIR676-201ENST00000390702 67 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 MTND4LP16-201ENST00000440828 295 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AC004386.2-201ENST00000441858 148 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 RNU1-131P-201ENST00000458943 161 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.97□□□□□ -2.09
ERCC2P18074 RNVU1-2-201ENST00000516326 135 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.97□□□□□ -2.09
ERCC2P18074 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.97□□□□□ -2.09
ERCC2P18074 AC124303.1-201ENST00000605703 360 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AC084782.3-201ENST00000612282 578 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.97□□□□□ -2.09
ERCC2P18074 AC093913.1-201ENST00000614178 329 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 U6atac.1-201ENST00000616025 117 ntBASIC1.97□□□□□ -2.09
ERCC2P18074 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
ERCC2P18074 RNU6-306P-201ENST00000384617 107 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 MIR487A-201ENST00000385009 80 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ERCC2P18074 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.96□□□□□ -2.1
ERCC2P18074 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 RPL23AP42-201ENST00000471152 471 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 ACA59.1-201ENST00000515966 143 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 SNORA59B-202ENST00000578183 701 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 MIR5006-201ENST00000583027 110 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 AC018638.8-201ENST00000588755 281 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 AC009318.2-201ENST00000610917 651 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
ERCC2P18074 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.96□□□□□ -2.1
ERCC2P18074 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.96□□□□□ -2.1
ERCC2P18074 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ERCC2P18074 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ERCC2P18074 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
ERCC2P18074 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
ERCC2P18074 SNORD114-1-201ENST00000362705 72 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 RNU6-1013P-201ENST00000384180 107 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AL358453.1-201ENST00000422522 250 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 MTCO1P44-201ENST00000441935 243 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 FGF7P6-202ENST00000451282 293 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 MTCO3P8-201ENST00000453691 755 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.95□□□□□ -2.1
ERCC2P18074 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 RNU4-49P-201ENST00000516080 140 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.95□□□□□ -2.1
ERCC2P18074 AF235103.2-201ENST00000525753 346 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC026470.2-201ENST00000561492 181 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.95□□□□□ -2.1
ERCC2P18074 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 RMST_6.1-201ENST00000611980 203 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 TCL6_2.1-201ENST00000615162 119 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC137590.2-201ENST00000619709 240 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 DUXAP9-208ENST00000622815 614 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC022513.1-201ENST00000624512 117 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.95□□□□□ -2.1
ERCC2P18074 SCARNA4-201ENST00000629045 128 ntBASIC1.95□□□□□ -2.1
ERCC2P18074 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ERCC2P18074 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ERCC2P18074 Y_RNA.132-201ENST00000363421 102 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 RPL30P16-201ENST00000419341 429 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 EIF4EP2-201ENST00000422816 654 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 Z82188.1-201ENST00000436709 154 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.94□□□□□ -2.1
ERCC2P18074 AC007395.1-201ENST00000451333 677 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 AC010531.2-201ENST00000465012 153 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 RNU6-566P-201ENST00000516790 107 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 RNA5SP454-201ENST00000517231 127 ntBASIC1.94□□□□□ -2.1
ERCC2P18074 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.94□□□□□ -2.1
ERCC2P18074 AC010928.2-201ENST00000588017 287 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms