Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AP003716.2-201ENST00000528260 108 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.33□□□□□ -2.46
HIST1H1DP16402 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AL512347.1-201ENST00000566420 503 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC234772.3-201ENST00000602277 528 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC146944.4-201ENST00000602697 718 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.33□□□□□ -2.46
HIST1H1DP16402 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 AC091925.1-201ENST00000623204 462 ntBASIC-0.33□□□□□ -2.46
HIST1H1DP16402 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 RNU6-527P-201ENST00000363425 104 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 MIR1283-1-201ENST00000408494 87 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 AC078809.1-201ENST00000427601 140 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 AC245047.3-201ENST00000429428 127 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 MTCO1P27-201ENST00000448269 226 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 snoU13.18-201ENST00000459483 104 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 RN7SL793P-201ENST00000583259 296 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 U6.108-201ENST00000637764 58 ntBASIC-0.34□□□□□ -2.46
HIST1H1DP16402 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
HIST1H1DP16402 MIR18A-201ENST00000362310 71 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-105P-201ENST00000363909 104 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-43P-201ENST00000384302 107 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-417P-201ENST00000384712 107 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-57P-201ENST00000411348 103 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AL354692.1-201ENST00000423044 315 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 SEPT7P4-201ENST00000437076 306 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC243964.1-201ENST00000441814 261 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AL049829.1-201ENST00000465411 156 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC074133.1-201ENST00000515696 183 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 SNORA25.12-201ENST00000516202 82 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 RNU6-948P-201ENST00000516374 107 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC112693.2-201ENST00000556538 232 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC004584.2-201ENST00000570407 410 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
HIST1H1DP16402 AC009994.1-201ENST00000606889 253 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 MIR6079-201ENST00000635807 62 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 U4.7-201ENST00000638126 106 ntBASIC-0.35□□□□□ -2.47
HIST1H1DP16402 MIR330-201ENST00000362196 94 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-545P-201ENST00000362681 104 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-511P-201ENST00000363496 107 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-960P-201ENST00000364056 120 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-514P-201ENST00000384208 107 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 SNORD111-201ENST00000408139 94 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 MIR1287-201ENST00000408492 90 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 MTATP6P16-201ENST00000434543 526 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RPL37P21-201ENST00000435890 276 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 ELOCP24-201ENST00000456370 334 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 SNORA40.12-201ENST00000516329 111 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AF235103.2-201ENST00000525753 346 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AC023157.2-201ENST00000540596 141 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AL391840.1-201ENST00000571144 367 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 OR4H6P-202ENST00000603819 340 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AC005520.5-201ENST00000613926 164 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AL359547.2-201ENST00000615810 418 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 AC097372.5-201ENST00000623665 376 ntBASIC-0.36□□□□□ -2.47
HIST1H1DP16402 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
HIST1H1DP16402 RNU6-236P-201ENST00000363886 106 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 RNU6V-201ENST00000384105 107 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 RNU6-378P-201ENST00000384324 107 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 MIR518E-201ENST00000385252 88 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 RNU6-994P-201ENST00000410507 111 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 ELOCP17-201ENST00000414751 326 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC010975.2-201ENST00000427781 588 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC104136.1-201ENST00000512969 394 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 RNU1-142P-201ENST00000516682 145 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.37□□□□□ -2.47
HIST1H1DP16402 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC090517.1-201ENST00000569307 266 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 MIR4753-201ENST00000585119 83 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC010620.1-201ENST00000601088 1102 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AL359697.1-201ENST00000624879 587 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AC073544.1-201ENST00000600110 1595 ntBASIC-0.37□□□□□ -2.47
HIST1H1DP16402 AP000568.1-201ENST00000282964 442 ntBASIC-0.38□□□□□ -2.47
HIST1H1DP16402 RNU6-562P-201ENST00000362731 107 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms