Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MIR4753-201ENST00000585119 83 ntBASIC1.32□□□□□ -2.2
NCK1P16333 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
NCK1P16333 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
NCK1P16333 MIR3974-201ENST00000637126 96 ntBASIC1.32□□□□□ -2.2
NCK1P16333 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
NCK1P16333 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
NCK1P16333 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
NCK1P16333 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NCK1P16333 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.31□□□□□ -2.2
NCK1P16333 SNRPEP10-201ENST00000420249 274 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC027119.1-201ENST00000440877 241 ntBASIC1.31□□□□□ -2.2
NCK1P16333 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.31□□□□□ -2.2
NCK1P16333 HMGN2P9-201ENST00000476875 229 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.31□□□□□ -2.2
NCK1P16333 AC011406.1-201ENST00000512440 370 ntBASIC1.31□□□□□ -2.2
NCK1P16333 RNA5SP437-201ENST00000517249 129 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.31□□□□□ -2.2
NCK1P16333 DEFB131C-201ENST00000528817 165 ntBASIC1.31□□□□□ -2.2
NCK1P16333 CPDP1-201ENST00000579660 283 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AP000942.3-201ENST00000603702 160 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC104458.1-201ENST00000608243 463 ntBASIC1.31□□□□□ -2.2
NCK1P16333 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC064836.2-201ENST00000609491 462 ntBASIC1.31□□□□□ -2.2
NCK1P16333 MTND4P5-201ENST00000435821 1374 ntBASIC1.31□□□□□ -2.2
NCK1P16333 AC121333.1-201ENST00000567488 2709 ntBASIC1.31□□□□□ -2.2
NCK1P16333 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
NCK1P16333 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
NCK1P16333 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
NCK1P16333 RNU6-877P-201ENST00000383868 107 ntBASIC1.3□□□□□ -2.2
NCK1P16333 RNU6-975P-201ENST00000384296 105 ntBASIC1.3□□□□□ -2.2
NCK1P16333 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
NCK1P16333 RNU4-55P-201ENST00000410731 137 ntBASIC1.3□□□□□ -2.2
NCK1P16333 RNU2-7P-201ENST00000410794 178 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AC060773.1-201ENST00000421698 310 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AL603825.1-201ENST00000438481 80 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AC009237.7-201ENST00000447357 229 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AL157687.1-201ENST00000554853 619 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AC092747.3-201ENST00000603769 301 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AC073534.2-201ENST00000620377 381 ntBASIC1.3□□□□□ -2.2
NCK1P16333 AL121890.5-201ENST00000620848 304 ntBASIC1.3□□□□□ -2.2
NCK1P16333 ELL2P3-201ENST00000457883 1602 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNU6-545P-201ENST00000362681 104 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNU6-784P-201ENST00000384330 106 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNY3P9-201ENST00000384727 106 ntBASIC1.29□□□□□ -2.2
NCK1P16333 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
NCK1P16333 EIF4E2P1-201ENST00000393781 255 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNA5SP494-201ENST00000410653 129 ntBASIC1.29□□□□□ -2.2
NCK1P16333 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.29□□□□□ -2.2
NCK1P16333 MTCO1P19-201ENST00000443487 500 ntBASIC1.29□□□□□ -2.2
NCK1P16333 AC074290.1-201ENST00000448883 135 ntBASIC1.29□□□□□ -2.2
NCK1P16333 OR2AQ1P-201ENST00000451972 200 ntBASIC1.29□□□□□ -2.2
NCK1P16333 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.29□□□□□ -2.2
NCK1P16333 RNU6-1208P-201ENST00000459588 107 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNU6-1146P-201ENST00000516282 102 ntBASIC1.29□□□□□ -2.2
NCK1P16333 RNA5SP384-201ENST00000516615 116 ntBASIC1.29□□□□□ -2.2
NCK1P16333 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
NCK1P16333 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
NCK1P16333 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.29□□□□□ -2.2
NCK1P16333 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NCK1P16333 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.29□□□□□ -2.2
NCK1P16333 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
NCK1P16333 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
NCK1P16333 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
NCK1P16333 MIR5692C1-201ENST00000585309 91 ntBASIC1.29□□□□□ -2.2
NCK1P16333 SNRPGP20-201ENST00000604477 205 ntBASIC1.29□□□□□ -2.2
NCK1P16333 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
NCK1P16333 PRR13P7-201ENST00000605538 430 ntBASIC1.29□□□□□ -2.2
NCK1P16333 MIR8076-201ENST00000611401 83 ntBASIC1.29□□□□□ -2.2
NCK1P16333 MIR338-201ENST00000636369 67 ntBASIC1.29□□□□□ -2.2
NCK1P16333 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
NCK1P16333 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
NCK1P16333 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NCK1P16333 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RNU6-214P-201ENST00000384130 107 ntBASIC1.28□□□□□ -2.2
NCK1P16333 MIR194-1-201ENST00000384892 85 ntBASIC1.28□□□□□ -2.2
NCK1P16333 MIR586-201ENST00000385035 97 ntBASIC1.28□□□□□ -2.2
NCK1P16333 MIR320B2-201ENST00000408479 138 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RPL23AP36-201ENST00000413895 458 ntBASIC1.28□□□□□ -2.2
NCK1P16333 EIF1P1-201ENST00000421436 341 ntBASIC1.28□□□□□ -2.2
NCK1P16333 MTCO1P20-201ENST00000425366 358 ntBASIC1.28□□□□□ -2.2
NCK1P16333 NFU1P2-201ENST00000448700 469 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC010424.1-201ENST00000506336 297 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC010486.3-201ENST00000511602 785 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RNA5SP401-201ENST00000515920 127 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RNU6-1041P-201ENST00000516254 102 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
NCK1P16333 AC016727.2-201ENST00000603988 621 ntBASIC1.28□□□□□ -2.2
NCK1P16333 MIR3976-201ENST00000606807 139 ntBASIC1.28□□□□□ -2.2
NCK1P16333 AC245008.1-201ENST00000608123 476 ntBASIC1.28□□□□□ -2.2
NCK1P16333 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.28□□□□□ -2.2
NCK1P16333 AC139792.3-201ENST00000623525 224 ntBASIC1.28□□□□□ -2.2
NCK1P16333 RNU1-17P-201ENST00000363022 152 ntBASIC1.27□□□□□ -2.21
NCK1P16333 RNU6-418P-201ENST00000384035 107 ntBASIC1.27□□□□□ -2.21
NCK1P16333 MIR514A2-201ENST00000385131 88 ntBASIC1.27□□□□□ -2.21
NCK1P16333 MIR514A3-201ENST00000385132 88 ntBASIC1.27□□□□□ -2.21
NCK1P16333 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms