Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
SNRPA1P09661 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNRPA1P09661 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.16□□□□□ -1.9
SNRPA1P09661 Y_RNA.183-201ENST00000363882 113 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RNU6-487P-201ENST00000365430 104 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RNU6-611P-201ENST00000384276 104 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RNY3P4-201ENST00000384428 101 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 MIR153-2-201ENST00000385225 87 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 SNORD88.1-201ENST00000408684 91 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RNA5SP390-201ENST00000410191 113 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RN7SKP61-201ENST00000410642 295 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 RPL21P38-201ENST00000418090 167 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 AL445305.1-201ENST00000432577 575 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.16□□□□□ -1.9
SNRPA1P09661 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.16□□□□□ -1.9
SNRPA1P09661 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.16□□□□□ -1.9
SNRPA1P09661 MIR5092-201ENST00000583139 88 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 AC096772.1-201ENST00000609146 564 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 AC011476.5-201ENST00000615594 130 ntBASIC3.16□□□□□ -1.9
SNRPA1P09661 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SNRPA1P09661 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.16□□□□□ -1.9
SNRPA1P09661 AL161431.1-201ENST00000618966 4205 ntBASIC3.15□□□□□ -1.9
SNRPA1P09661 AC010889.1-201ENST00000566193 2666 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SNRPA1P09661 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNRPA1P09661 OR56A5-201ENST00000340110 738 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 RNU6-1301P-201ENST00000362724 104 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 Y_RNA.288-201ENST00000364854 92 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 U8.10-201ENST00000384260 133 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 Y_RNA.476-201ENST00000384347 108 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 Z98742.3-201ENST00000418637 326 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.15□□□□□ -1.91
SNRPA1P09661 SDAD1P3-201ENST00000427380 333 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 AL121890.1-201ENST00000435457 205 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 AC098869.1-201ENST00000481627 292 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 AC234781.5-201ENST00000508429 271 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 RNU6-408P-201ENST00000515910 100 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 RNU6-1143P-201ENST00000516125 104 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 SNORA31.16-201ENST00000516773 139 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 MIR2355-201ENST00000517199 87 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.15□□□□□ -1.91
SNRPA1P09661 AP003733.2-201ENST00000529409 171 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.15□□□□□ -1.91
SNRPA1P09661 AC073410.2-201ENST00000603240 332 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.15□□□□□ -1.91
SNRPA1P09661 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
SNRPA1P09661 RNU6-1285P-201ENST00000363480 105 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 RNU6-879P-201ENST00000364328 108 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 Y_RNA.319-201ENST00000365138 92 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 RNU6-541P-201ENST00000384709 110 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AC004383.1-201ENST00000438135 289 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AC104389.3-201ENST00000445629 235 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AP000705.1-201ENST00000454567 350 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.14□□□□□ -1.91
SNRPA1P09661 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AC023157.2-201ENST00000540596 141 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AC016256.1-201ENST00000547971 354 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AC027288.2-201ENST00000553028 243 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 UBL5P4-201ENST00000562584 236 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 MIR3668-201ENST00000582138 75 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AL355877.2-201ENST00000603670 358 ntBASIC3.14□□□□□ -1.91
SNRPA1P09661 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.14□□□□□ -1.91
SNRPA1P09661 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SNRPA1P09661 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
SNRPA1P09661 AC016717.2-201ENST00000609089 5141 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNRPA1P09661 AC092268.1-201ENST00000342691 405 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 RNA5SP361-201ENST00000362686 118 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 RNU6-926P-201ENST00000384075 107 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 Y_RNA.439-201ENST00000384119 94 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 RNU6-318P-201ENST00000384283 103 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 RNU2-38P-201ENST00000410856 79 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AL590135.1-201ENST00000422215 156 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC019205.3-201ENST00000424573 156 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC078809.1-201ENST00000427601 140 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 EIF1P2-201ENST00000428233 350 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC016700.2-201ENST00000446011 156 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 RNU2-53P-201ENST00000516257 147 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC093023.1-201ENST00000547375 507 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC023824.2-201ENST00000566185 400 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 MIR5695-201ENST00000579717 85 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AL078605.1-201ENST00000603529 500 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC103810.6-201ENST00000606708 136 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AC046143.2-201ENST00000609789 160 ntBASIC3.13□□□□□ -1.91
SNRPA1P09661 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.13□□□□□ -1.91
SNRPA1P09661 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRPA1P09661 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
SNRPA1P09661 AC010615.1-201ENST00000594254 1764 ntBASIC3.12□□□□□ -1.91
SNRPA1P09661 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SNRPA1P09661 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.12□□□□□ -1.91
SNRPA1P09661 U8.2-201ENST00000363156 134 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms