Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 MRPS36P4-201ENST00000534436 298 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 AC093249.1-201ENST00000567049 203 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 MIR5696-201ENST00000578474 85 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 AL356157.2-201ENST00000605122 111 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 AC005014.2-201ENST00000607795 599 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 U4atac.1-201ENST00000618345 95 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 AL353997.5-201ENST00000618886 171 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 uc_338.20-201ENST00000621563 178 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 MTND5P9-201ENST00000503854 1755 ntBASIC1.99□□□□□ -2.09
HOXD4P09016 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXD4P09016 Z75746.1-201ENST00000440243 2080 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXD4P09016 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 Y_RNA.138-201ENST00000363462 102 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 Y_RNA.146-201ENST00000363549 102 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 RNA5SP125-201ENST00000364843 120 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 Y_RNA.504-201ENST00000384481 104 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 MIR186-201ENST00000384988 86 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AL354751.2-201ENST00000415471 210 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC097463.2-201ENST00000421074 142 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AL353997.1-201ENST00000432936 108 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC244670.1-201ENST00000436879 112 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC018634.1-201ENST00000437554 401 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXD4P09016 AC007677.1-201ENST00000445757 515 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 Y_RNA.701-201ENST00000516812 110 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXD4P09016 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXD4P09016 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.98□□□□□ -2.09
HOXD4P09016 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXD4P09016 AC044792.1-201ENST00000593294 196 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC073410.2-201ENST00000603240 332 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AC007792.1-201ENST00000623023 402 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 AL450472.1-202ENST00000637286 180 ntBASIC1.98□□□□□ -2.09
HOXD4P09016 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HOXD4P09016 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HOXD4P09016 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HOXD4P09016 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXD4P09016 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HOXD4P09016 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXD4P09016 ZNF299P-201ENST00000406845 1804 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 MTND5P10-201ENST00000603719 1809 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 MIR369-201ENST00000362155 70 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 SNORD42.2-201ENST00000365570 69 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU6-1286P-201ENST00000383871 107 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU6-1040P-201ENST00000383974 107 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU6-968P-201ENST00000384076 107 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 SNORA36A-201ENST00000384221 132 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU1-57P-201ENST00000384491 166 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 MIR559-201ENST00000385188 96 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD4P09016 AC008267.5-201ENST00000424928 265 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AIMP1P2-201ENST00000425294 312 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RPL23AP50-201ENST00000434149 455 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD4P09016 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXD4P09016 snoU13.14-201ENST00000459372 104 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RPL30P1-201ENST00000488676 339 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC104564.1-201ENST00000493028 407 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD4P09016 AC022493.2-201ENST00000506122 481 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 RNU6-1170P-201ENST00000515974 106 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 SNORA31.16-201ENST00000516773 139 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC109329.1-201ENST00000518744 317 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC007375.1-201ENST00000554513 578 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXD4P09016 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD4P09016 AC005899.2-201ENST00000584353 90 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HOXD4P09016 AL356055.1-201ENST00000602528 446 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AL080274.1-201ENST00000605565 220 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 AC090971.5-201ENST00000621102 293 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HOXD4P09016 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
HOXD4P09016 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXD4P09016 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
HOXD4P09016 AC233981.2-201ENST00000611524 1614 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 AC092268.1-201ENST00000342691 405 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 RNU6-595P-201ENST00000363944 107 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 SNORA26.3-201ENST00000391119 136 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 RNU2-63P-201ENST00000410792 194 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 EIF1AXP1-201ENST00000419267 435 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 AL358453.1-201ENST00000422522 250 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 EIF4EP4-201ENST00000424916 578 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 MTCO2P12-201ENST00000427426 682 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 AC078809.1-201ENST00000427601 140 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 GPM6BP3-201ENST00000442797 145 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXD4P09016 AL121594.1-201ENST00000475906 575 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 AC016632.1-201ENST00000503994 196 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 RNU5F-2P-201ENST00000516066 82 ntBASIC1.96□□□□□ -2.1
HOXD4P09016 RNU6-307P-201ENST00000516743 106 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms