Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC141273.2-201ENST00000618989 130 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 AC137590.2-201ENST00000619709 240 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.27□□□□□ -2.05
COL2A1P02458 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
COL2A1P02458 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
COL2A1P02458 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
COL2A1P02458 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COL2A1P02458 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
COL2A1P02458 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
COL2A1P02458 RNA5SP295-201ENST00000362655 121 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 Y_RNA.480-201ENST00000384364 102 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 Y_RNA.551-201ENST00000384661 102 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL2A1P02458 RNU4-62P-201ENST00000410125 130 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 MTCO3P29-201ENST00000432119 779 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 RPL37P6-201ENST00000460682 294 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC025033.1-201ENST00000463883 194 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RPL39P38-201ENST00000467018 153 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC139453.3-201ENST00000493276 369 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 SCARNA24.2-201ENST00000516968 130 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC069113.1-201ENST00000517763 267 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.26□□□□□ -2.05
COL2A1P02458 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 U73479.1-201ENST00000618062 168 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 MIR6130-201ENST00000619419 109 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.26□□□□□ -2.05
COL2A1P02458 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL2A1P02458 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
COL2A1P02458 HAUS6P2-201ENST00000433254 2404 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.26□□□□□ -2.05
COL2A1P02458 Y_RNA.16-201ENST00000362421 102 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RNU6-428P-201ENST00000362942 107 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 Y_RNA.277-201ENST00000364754 102 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RNU6-384P-201ENST00000364900 104 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RNU4-70P-201ENST00000384579 139 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 Y_RNA.534-201ENST00000384599 112 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 MIR625-201ENST00000385047 85 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
COL2A1P02458 MIR1250-201ENST00000408098 113 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RNU6-607P-201ENST00000411283 108 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC139712.2-201ENST00000424302 339 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AL121871.1-201ENST00000443413 436 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AL590664.1-201ENST00000448065 339 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 TRBVB-201ENST00000477100 408 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.26□□□□□ -2.05
COL2A1P02458 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.26□□□□□ -2.05
COL2A1P02458 SNORA31.3-201ENST00000516029 96 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RNU6-475P-201ENST00000516073 104 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 SNORA40.14-201ENST00000516543 86 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 DEFB108E-201ENST00000524692 240 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.26□□□□□ -2.05
COL2A1P02458 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.26□□□□□ -2.05
COL2A1P02458 AC004584.2-201ENST00000570407 410 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 RPS29P30-201ENST00000600975 111 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 AL450472.1-202ENST00000637286 180 ntBASIC2.26□□□□□ -2.05
COL2A1P02458 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
COL2A1P02458 AP000560.1-201ENST00000624150 1937 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL2A1P02458 AL157777.2-201ENST00000258070 137 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 Y_RNA.143-201ENST00000363520 106 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 Y_RNA.237-201ENST00000364439 102 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNA5SP190-201ENST00000365222 118 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 Y_RNA.358-201ENST00000365491 99 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 Y_RNA.515-201ENST00000384535 112 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 Y_RNA.539-201ENST00000384635 107 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 MIR1276-201ENST00000408707 83 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNU6-1025P-201ENST00000410629 104 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNU2-14P-201ENST00000411053 191 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNU2-64P-201ENST00000411315 191 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AL590135.1-201ENST00000422215 156 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 PIGPP3-201ENST00000425307 415 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC092573.2-201ENST00000434546 243 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC003989.2-201ENST00000440224 169 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC073910.1-201ENST00000445047 438 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 U8.22-201ENST00000459141 133 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNU6-1023P-201ENST00000516137 106 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 RNU6-143P-201ENST00000516942 93 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 SNORA31.26-201ENST00000517250 137 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.25□□□□□ -2.05
COL2A1P02458 SNORA4-201ENST00000584302 138 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 VN1R91P-201ENST00000594377 169 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 AC130454.1-201ENST00000622948 401 ntBASIC2.25□□□□□ -2.05
COL2A1P02458 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
COL2A1P02458 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL2A1P02458 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL2A1P02458 RNU5A-1-201ENST00000362698 116 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 RNU6-1062P-201ENST00000383908 107 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 SNORA19-201ENST00000384737 128 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 MIR628-201ENST00000385229 95 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 SNORA69.1-201ENST00000390904 137 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 MIR548M-201ENST00000408260 86 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AL353621.1-201ENST00000418219 243 ntBASIC2.24□□□□□ -2.05
COL2A1P02458 AL358453.1-201ENST00000422522 250 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms