Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN1O95832 RNU7-26P-201ENST00000458980 63 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC027575.1-201ENST00000481064 460 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RPL17P19-201ENST00000489069 552 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC107222.1-201ENST00000510899 637 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN1O95832 RNU6-976P-201ENST00000516086 111 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RNU2-53P-201ENST00000516257 147 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 SNORA31.11-201ENST00000516528 139 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 HSPE1P18-201ENST00000517602 280 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN1O95832 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN1O95832 MYL12BP1-201ENST00000569826 507 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC104581.2-201ENST00000572227 430 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC105245.1-201ENST00000581934 244 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 MIR3616-201ENST00000584070 92 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN1O95832 Z98751.3-201ENST00000604447 521 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 AC090971.5-201ENST00000621102 293 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 SNORD98-201ENST00000636377 67 ntBASIC2.09□□□□□ -2.07
CLDN1O95832 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CLDN1O95832 Z82209.1-201ENST00000422141 2135 ntBASIC2.09□□□□□ -2.08
CLDN1O95832 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLDN1O95832 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
CLDN1O95832 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN1O95832 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN1O95832 Y_RNA.5-201ENST00000362334 102 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 RNU6-490P-201ENST00000362985 107 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 RNY1P16-201ENST00000363063 111 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 Y_RNA.252-201ENST00000364556 101 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 SNORA80E-201ENST00000384744 137 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 MTCYBP2-201ENST00000407745 171 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AL590135.1-201ENST00000422215 156 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC018865.2-201ENST00000423631 129 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC019205.3-201ENST00000424573 156 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN1O95832 AC016700.2-201ENST00000446011 156 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.08□□□□□ -2.08
CLDN1O95832 RPL23AP75-201ENST00000491601 451 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC015911.1-201ENST00000495111 156 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC022493.2-201ENST00000506122 481 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
CLDN1O95832 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN1O95832 RNU6-567P-201ENST00000516746 107 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.08□□□□□ -2.08
CLDN1O95832 AL590705.4-201ENST00000532209 134 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 uc_338.22-201ENST00000622722 187 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AC134503.1-201ENST00000633048 54 ntBASIC2.08□□□□□ -2.08
CLDN1O95832 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN1O95832 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.08□□□□□ -2.08
CLDN1O95832 Y_RNA.48-201ENST00000362710 103 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 Y_RNA.138-201ENST00000363462 102 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 SNORA67.1-201ENST00000364749 141 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 Y_RNA.355-201ENST00000365462 98 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 RNU6-1227P-201ENST00000383981 107 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 U8.10-201ENST00000384260 133 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 Y_RNA.577-201ENST00000384794 101 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN1O95832 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN1O95832 AL353752.1-201ENST00000454946 260 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDN1O95832 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.07□□□□□ -2.08
CLDN1O95832 CYP4A27P-201ENST00000567218 190 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 AL713866.2-201ENST00000603579 219 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 AL356280.1-201ENST00000603614 379 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 SNRPGP17-201ENST00000603780 214 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDN1O95832 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLDN1O95832 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLDN1O95832 AC069528.2-201ENST00000624849 1991 ntBASIC2.07□□□□□ -2.08
CLDN1O95832 RNU4-15P-201ENST00000362613 141 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SNORD115-8-201ENST00000363856 82 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SNORD115-38-201ENST00000365037 82 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 RNU6-17P-201ENST00000384245 107 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 Y_RNA.496-201ENST00000384444 101 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 RNU6-18P-201ENST00000384527 107 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SNORA12.2-201ENST00000391040 156 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC012306.1-201ENST00000423267 114 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN1O95832 MTCO2P12-201ENST00000427426 682 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.06□□□□□ -2.08
CLDN1O95832 AL353997.1-201ENST00000432936 108 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 CR769767.1-201ENST00000436337 346 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 Z82188.1-201ENST00000436709 154 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDN1O95832 MIR2053-201ENST00000459295 91 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 AC087477.1-201ENST00000465747 340 ntBASIC2.06□□□□□ -2.08
CLDN1O95832 SNRPGP7-201ENST00000469016 106 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms