Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AL391516.1-201ENST00000554380 2449 ntBASIC1.12□□□□□ -2.23
SNX4O95219 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
SNX4O95219 RNU4-91P-201ENST00000364778 135 ntBASIC1.11□□□□□ -2.23
SNX4O95219 RNU6-975P-201ENST00000384296 105 ntBASIC1.11□□□□□ -2.23
SNX4O95219 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SNX4O95219 AC133104.1-201ENST00000429100 218 ntBASIC1.11□□□□□ -2.23
SNX4O95219 HSPE1P13-201ENST00000451143 297 ntBASIC1.11□□□□□ -2.23
SNX4O95219 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.11□□□□□ -2.23
SNX4O95219 SNRPFP3-201ENST00000457792 225 ntBASIC1.11□□□□□ -2.23
SNX4O95219 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.11□□□□□ -2.23
SNX4O95219 AP002963.1-201ENST00000530590 184 ntBASIC1.11□□□□□ -2.23
SNX4O95219 AC009161.2-201ENST00000624626 138 ntBASIC1.11□□□□□ -2.23
SNX4O95219 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX4O95219 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX4O95219 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX4O95219 DYNLT3P2-201ENST00000442517 295 ntBASIC1.1□□□□□ -2.23
SNX4O95219 SNORD42A-201ENST00000459584 64 ntBASIC1.1□□□□□ -2.23
SNX4O95219 AL137161.1-201ENST00000532231 390 ntBASIC1.1□□□□□ -2.23
SNX4O95219 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.1□□□□□ -2.23
SNX4O95219 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX4O95219 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.1□□□□□ -2.23
SNX4O95219 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.1□□□□□ -2.23
SNX4O95219 RPS26P42-201ENST00000413485 326 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.09□□□□□ -2.23
SNX4O95219 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.09□□□□□ -2.23
SNX4O95219 SNORA18.6-201ENST00000516792 115 ntBASIC1.09□□□□□ -2.23
SNX4O95219 RNU6-232P-201ENST00000517144 64 ntBASIC1.09□□□□□ -2.23
SNX4O95219 DEFB131C-201ENST00000528817 165 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AL391840.1-201ENST00000571144 367 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AC136932.1-201ENST00000574771 208 ntBASIC1.09□□□□□ -2.23
SNX4O95219 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AP001596.2-201ENST00000608410 312 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AC122133.1-201ENST00000613964 233 ntBASIC1.09□□□□□ -2.23
SNX4O95219 AC079248.2-201ENST00000623779 326 ntBASIC1.09□□□□□ -2.23
SNX4O95219 MIR222-201ENST00000384992 110 ntBASIC1.08□□□□□ -2.24
SNX4O95219 MIR1253-201ENST00000408273 105 ntBASIC1.08□□□□□ -2.24
SNX4O95219 PIGFP2-201ENST00000421400 651 ntBASIC1.08□□□□□ -2.24
SNX4O95219 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
SNX4O95219 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
SNX4O95219 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
SNX4O95219 AC004386.2-201ENST00000441858 148 ntBASIC1.08□□□□□ -2.24
SNX4O95219 NFU1P2-201ENST00000448700 469 ntBASIC1.08□□□□□ -2.24
SNX4O95219 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.08□□□□□ -2.24
SNX4O95219 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.08□□□□□ -2.24
SNX4O95219 MIR4781-201ENST00000585250 76 ntBASIC1.08□□□□□ -2.24
SNX4O95219 AC234772.3-201ENST00000602277 528 ntBASIC1.08□□□□□ -2.24
SNX4O95219 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
SNX4O95219 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SNX4O95219 RNU6-227P-201ENST00000362865 103 ntBASIC1.07□□□□□ -2.24
SNX4O95219 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
SNX4O95219 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
SNX4O95219 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
SNX4O95219 AC010099.3-201ENST00000423896 409 ntBASIC1.07□□□□□ -2.24
SNX4O95219 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX4O95219 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.07□□□□□ -2.24
SNX4O95219 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX4O95219 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.07□□□□□ -2.24
SNX4O95219 RNU6-1037P-201ENST00000459571 107 ntBASIC1.07□□□□□ -2.24
SNX4O95219 RPL39P38-201ENST00000467018 153 ntBASIC1.07□□□□□ -2.24
SNX4O95219 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX4O95219 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX4O95219 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
SNX4O95219 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.07□□□□□ -2.24
SNX4O95219 AC009509.4-201ENST00000619202 509 ntBASIC1.07□□□□□ -2.24
SNX4O95219 AF246928.1-201ENST00000623768 87 ntBASIC1.07□□□□□ -2.24
SNX4O95219 AC068647.2-201ENST00000637380 353 ntBASIC1.07□□□□□ -2.24
SNX4O95219 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SNX4O95219 Y_RNA.4-201ENST00000362333 112 ntBASIC1.06□□□□□ -2.24
SNX4O95219 RNU6-553P-201ENST00000364047 96 ntBASIC1.06□□□□□ -2.24
SNX4O95219 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.06□□□□□ -2.24
SNX4O95219 CYCSP46-201ENST00000423569 204 ntBASIC1.06□□□□□ -2.24
SNX4O95219 AC009237.7-201ENST00000447357 229 ntBASIC1.06□□□□□ -2.24
SNX4O95219 AC016717.1-201ENST00000448918 286 ntBASIC1.06□□□□□ -2.24
SNX4O95219 snoU13.6-201ENST00000458785 104 ntBASIC1.06□□□□□ -2.24
SNX4O95219 RNU7-138P-201ENST00000459479 64 ntBASIC1.06□□□□□ -2.24
SNX4O95219 RNU6-612P-201ENST00000516909 102 ntBASIC1.06□□□□□ -2.24
SNX4O95219 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
SNX4O95219 AC009094.1-201ENST00000564443 426 ntBASIC1.06□□□□□ -2.24
SNX4O95219 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
SNX4O95219 BNIP3P39-201ENST00000601077 554 ntBASIC1.06□□□□□ -2.24
SNX4O95219 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
SNX4O95219 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SNX4O95219 RNU6-181P-201ENST00000363225 107 ntBASIC1.05□□□□□ -2.24
SNX4O95219 RPL21P1-201ENST00000399532 476 ntBASIC1.05□□□□□ -2.24
SNX4O95219 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
SNX4O95219 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.05□□□□□ -2.24
SNX4O95219 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.05□□□□□ -2.24
SNX4O95219 AL356010.1-201ENST00000456364 102 ntBASIC1.05□□□□□ -2.24
SNX4O95219 RNU7-125P-201ENST00000458760 62 ntBASIC1.05□□□□□ -2.24
SNX4O95219 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.05□□□□□ -2.24
SNX4O95219 HMGN1P7-201ENST00000491722 313 ntBASIC1.05□□□□□ -2.24
SNX4O95219 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.05□□□□□ -2.24
SNX4O95219 AC010493.1-201ENST00000513479 292 ntBASIC1.05□□□□□ -2.24
SNX4O95219 RNU6-445P-201ENST00000516949 107 ntBASIC1.05□□□□□ -2.24
SNX4O95219 SUMO2P16-201ENST00000519475 264 ntBASIC1.05□□□□□ -2.24
SNX4O95219 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SNX4O95219 Z99497.2-201ENST00000603634 310 ntBASIC1.05□□□□□ -2.24
SNX4O95219 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.05□□□□□ -2.24
SNX4O95219 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.05□□□□□ -2.24
SNX4O95219 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms