Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SNORA51.11-201ENST00000384442 131 ntBASIC2.09□□□□□ -2.07
BEST1O76090 Y_RNA.505-201ENST00000384489 102 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AL139396.1-201ENST00000421137 167 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AC244636.1-201ENST00000421152 228 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST1O76090 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.09□□□□□ -2.07
BEST1O76090 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST1O76090 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST1O76090 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.09□□□□□ -2.07
BEST1O76090 MTND1P17-201ENST00000448961 204 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AC082651.2-201ENST00000496833 166 ntBASIC2.09□□□□□ -2.07
BEST1O76090 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
BEST1O76090 RNU4-49P-201ENST00000516080 140 ntBASIC2.09□□□□□ -2.07
BEST1O76090 RNU6-1088P-201ENST00000516850 104 ntBASIC2.09□□□□□ -2.07
BEST1O76090 RNU6-273P-201ENST00000516937 96 ntBASIC2.09□□□□□ -2.07
BEST1O76090 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AC005786.1-201ENST00000588553 154 ntBASIC2.09□□□□□ -2.07
BEST1O76090 BNIP3P10-201ENST00000605360 577 ntBASIC2.09□□□□□ -2.07
BEST1O76090 AC122108.2-201ENST00000611946 526 ntBASIC2.09□□□□□ -2.07
BEST1O76090 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.09□□□□□ -2.07
BEST1O76090 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.09□□□□□ -2.07
BEST1O76090 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.09□□□□□ -2.07
BEST1O76090 MTND4P5-201ENST00000435821 1374 ntBASIC2.09□□□□□ -2.08
BEST1O76090 MTND5P9-201ENST00000503854 1755 ntBASIC2.08□□□□□ -2.08
BEST1O76090 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.08□□□□□ -2.08
BEST1O76090 BX322639.1-202ENST00000423987 2213 ntBASIC2.08□□□□□ -2.08
BEST1O76090 Y_RNA.86-201ENST00000363020 111 ntBASIC2.08□□□□□ -2.08
BEST1O76090 SNORD115-32-201ENST00000364079 82 ntBASIC2.08□□□□□ -2.08
BEST1O76090 SNORA48.1-201ENST00000390879 135 ntBASIC2.08□□□□□ -2.08
BEST1O76090 SNORA12.2-201ENST00000391040 156 ntBASIC2.08□□□□□ -2.08
BEST1O76090 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
BEST1O76090 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
BEST1O76090 RNA5SP501-201ENST00000410990 112 ntBASIC2.08□□□□□ -2.08
BEST1O76090 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.08□□□□□ -2.08
BEST1O76090 AL358453.1-201ENST00000422522 250 ntBASIC2.08□□□□□ -2.08
BEST1O76090 AC139712.2-201ENST00000424302 339 ntBASIC2.08□□□□□ -2.08
BEST1O76090 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.08□□□□□ -2.08
BEST1O76090 RNU6-358P-201ENST00000516564 75 ntBASIC2.08□□□□□ -2.08
BEST1O76090 RNU6-1198P-201ENST00000516904 67 ntBASIC2.08□□□□□ -2.08
BEST1O76090 RNA5SP54-201ENST00000516951 92 ntBASIC2.08□□□□□ -2.08
BEST1O76090 RNU1-54P-201ENST00000517181 120 ntBASIC2.08□□□□□ -2.08
BEST1O76090 DEFB131C-201ENST00000528817 165 ntBASIC2.08□□□□□ -2.08
BEST1O76090 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.08□□□□□ -2.08
BEST1O76090 AC092794.1-201ENST00000612734 582 ntBASIC2.08□□□□□ -2.08
BEST1O76090 AC009248.2-201ENST00000619826 254 ntBASIC2.08□□□□□ -2.08
BEST1O76090 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
BEST1O76090 MIR340-201ENST00000362125 95 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AC004386.2-201ENST00000441858 148 ntBASIC2.07□□□□□ -2.08
BEST1O76090 MTCO1P44-201ENST00000441935 243 ntBASIC2.07□□□□□ -2.08
BEST1O76090 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
BEST1O76090 NFU1P2-201ENST00000448700 469 ntBASIC2.07□□□□□ -2.08
BEST1O76090 RNU6-329P-201ENST00000459618 107 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.07□□□□□ -2.08
BEST1O76090 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.07□□□□□ -2.08
BEST1O76090 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.07□□□□□ -2.08
BEST1O76090 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.07□□□□□ -2.08
BEST1O76090 MIR5006-201ENST00000583027 110 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.07□□□□□ -2.08
BEST1O76090 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
BEST1O76090 7SK.7-201ENST00000603504 247 ntBASIC2.07□□□□□ -2.08
BEST1O76090 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.07□□□□□ -2.08
BEST1O76090 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BEST1O76090 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
BEST1O76090 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
BEST1O76090 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
BEST1O76090 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
BEST1O76090 SNORD115-8-201ENST00000363856 82 ntBASIC2.06□□□□□ -2.08
BEST1O76090 SNORD115-38-201ENST00000365037 82 ntBASIC2.06□□□□□ -2.08
BEST1O76090 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST1O76090 MIR1283-1-201ENST00000408494 87 ntBASIC2.06□□□□□ -2.08
BEST1O76090 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
BEST1O76090 AC009237.7-201ENST00000447357 229 ntBASIC2.06□□□□□ -2.08
BEST1O76090 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
BEST1O76090 MTND4LP26-201ENST00000518144 282 ntBASIC2.06□□□□□ -2.08
BEST1O76090 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST1O76090 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.06□□□□□ -2.08
BEST1O76090 MIR5696-201ENST00000578474 85 ntBASIC2.06□□□□□ -2.08
BEST1O76090 MIR4273-201ENST00000582824 84 ntBASIC2.06□□□□□ -2.08
BEST1O76090 AC060780.3-201ENST00000589464 80 ntBASIC2.06□□□□□ -2.08
BEST1O76090 AL158827.2-201ENST00000602494 330 ntBASIC2.06□□□□□ -2.08
BEST1O76090 AL691447.3-201ENST00000635020 330 ntBASIC2.06□□□□□ -2.08
BEST1O76090 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
BEST1O76090 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
BEST1O76090 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
BEST1O76090 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
BEST1O76090 RNU6-545P-201ENST00000362681 104 ntBASIC2.05□□□□□ -2.08
BEST1O76090 Y_RNA.72-201ENST00000362894 103 ntBASIC2.05□□□□□ -2.08
BEST1O76090 RNU6-137P-201ENST00000363680 108 ntBASIC2.05□□□□□ -2.08
BEST1O76090 U8.10-201ENST00000384260 133 ntBASIC2.05□□□□□ -2.08
BEST1O76090 RNU6-306P-201ENST00000384617 107 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
BEST1O76090 RNU2-20P-201ENST00000410425 191 ntBASIC2.05□□□□□ -2.08
BEST1O76090 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
BEST1O76090 Y_RNA.619-201ENST00000410951 90 ntBASIC2.05□□□□□ -2.08
BEST1O76090 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.05□□□□□ -2.08
BEST1O76090 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
BEST1O76090 AL357134.1-201ENST00000445848 426 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms