Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKNO60260 MIR3923-201ENST00000579521 83 ntBASIC2.22□□□□□ -2.05
PRKNO60260 AC006504.6-201ENST00000590142 199 ntBASIC2.22□□□□□ -2.05
PRKNO60260 AL670379.2-201ENST00000604983 252 ntBASIC2.22□□□□□ -2.05
PRKNO60260 RMST_6.1-201ENST00000611980 203 ntBASIC2.22□□□□□ -2.05
PRKNO60260 AC090517.3-201ENST00000625170 141 ntBASIC2.22□□□□□ -2.05
PRKNO60260 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.22□□□□□ -2.05
PRKNO60260 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PRKNO60260 AC080128.1-201ENST00000474389 1917 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-1159P-201ENST00000362933 107 ntBASIC2.21□□□□□ -2.06
PRKNO60260 SNORD115-32-201ENST00000364079 82 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-461P-201ENST00000364195 107 ntBASIC2.21□□□□□ -2.06
PRKNO60260 SNORA63C-201ENST00000364578 129 ntBASIC2.21□□□□□ -2.06
PRKNO60260 Y_RNA.358-201ENST00000365491 99 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-17P-201ENST00000384245 107 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-18P-201ENST00000384527 107 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-738P-201ENST00000384531 106 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-1160P-201ENST00000384546 104 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-541P-201ENST00000384709 110 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR153-2-201ENST00000385225 87 ntBASIC2.21□□□□□ -2.06
PRKNO60260 SNORA69.1-201ENST00000390904 137 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MRPL42P3-201ENST00000401492 326 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AL445305.1-201ENST00000432577 575 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AL445687.1-201ENST00000439946 251 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RNU6-1045P-201ENST00000516321 107 ntBASIC2.21□□□□□ -2.06
PRKNO60260 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PRKNO60260 AC144568.1-201ENST00000520139 137 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.21□□□□□ -2.06
PRKNO60260 COX6CP5-201ENST00000527162 228 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AC023442.1-201ENST00000531247 422 ntBASIC2.21□□□□□ -2.06
PRKNO60260 HSBP1P1-201ENST00000555205 166 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AC006600.1-201ENST00000572529 153 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR5194-201ENST00000582634 120 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR3616-201ENST00000584070 92 ntBASIC2.21□□□□□ -2.06
PRKNO60260 AL132822.1-201ENST00000617063 513 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR1291-201ENST00000627649 87 ntBASIC2.21□□□□□ -2.06
PRKNO60260 MIR4272-201ENST00000635924 64 ntBASIC2.21□□□□□ -2.06
PRKNO60260 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PRKNO60260 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PRKNO60260 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
PRKNO60260 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKNO60260 RNU4-15P-201ENST00000362613 141 ntBASIC2.2□□□□□ -2.06
PRKNO60260 RNU6-639P-201ENST00000384074 107 ntBASIC2.2□□□□□ -2.06
PRKNO60260 U8.10-201ENST00000384260 133 ntBASIC2.2□□□□□ -2.06
PRKNO60260 RNU6-378P-201ENST00000384324 107 ntBASIC2.2□□□□□ -2.06
PRKNO60260 MIR549A-201ENST00000385268 96 ntBASIC2.2□□□□□ -2.06
PRKNO60260 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PRKNO60260 RNU6-1093P-201ENST00000391194 107 ntBASIC2.2□□□□□ -2.06
PRKNO60260 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PRKNO60260 OOSP1P1-201ENST00000423265 274 ntBASIC2.2□□□□□ -2.06
PRKNO60260 MICF-203ENST00000432679 129 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.2□□□□□ -2.06
PRKNO60260 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKNO60260 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
PRKNO60260 U8.22-201ENST00000459141 133 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC145146.1-201ENST00000496370 254 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
PRKNO60260 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.2□□□□□ -2.06
PRKNO60260 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC105245.1-201ENST00000581934 244 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC090616.3-201ENST00000582184 217 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AL162730.1-201ENST00000605734 292 ntBASIC2.2□□□□□ -2.06
PRKNO60260 SNORD58B-201ENST00000607313 66 ntBASIC2.2□□□□□ -2.06
PRKNO60260 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC137590.2-201ENST00000619709 240 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKNO60260 AC138305.3-201ENST00000624988 240 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AL606534.2-204ENST00000635008 178 ntBASIC2.2□□□□□ -2.06
PRKNO60260 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
PRKNO60260 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
PRKNO60260 AC091812.1-201ENST00000432235 1948 ntBASIC2.2□□□□□ -2.06
PRKNO60260 AC010329.5-201ENST00000623497 2174 ntBASIC2.2□□□□□ -2.06
PRKNO60260 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PRKNO60260 AC005592.1-201ENST00000566527 1640 ntBASIC2.2□□□□□ -2.06
PRKNO60260 MTND5P16-201ENST00000460269 1703 ntBASIC2.2□□□□□ -2.06
PRKNO60260 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
PRKNO60260 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
PRKNO60260 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRKNO60260 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PRKNO60260 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
PRKNO60260 RNU1-72P-201ENST00000362976 153 ntBASIC2.19□□□□□ -2.06
PRKNO60260 Y_RNA.319-201ENST00000365138 92 ntBASIC2.19□□□□□ -2.06
PRKNO60260 Y_RNA.422-201ENST00000384054 114 ntBASIC2.19□□□□□ -2.06
PRKNO60260 Y_RNA.592-201ENST00000410274 109 ntBASIC2.19□□□□□ -2.06
PRKNO60260 AC114482.1-201ENST00000418010 247 ntBASIC2.19□□□□□ -2.06
PRKNO60260 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.19□□□□□ -2.06
PRKNO60260 USP9YP16-201ENST00000430287 407 ntBASIC2.19□□□□□ -2.06
PRKNO60260 RPS15AP28-201ENST00000435088 386 ntBASIC2.19□□□□□ -2.06
PRKNO60260 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.19□□□□□ -2.06
PRKNO60260 USP9YP23-201ENST00000455085 407 ntBASIC2.19□□□□□ -2.06
PRKNO60260 AP000870.1-201ENST00000472927 406 ntBASIC2.19□□□□□ -2.06
PRKNO60260 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.19□□□□□ -2.06
PRKNO60260 ANXA2P1-201ENST00000505539 926 ntBASIC2.19□□□□□ -2.06
PRKNO60260 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
PRKNO60260 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.19□□□□□ -2.06
PRKNO60260 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms