Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU1-54P-201ENST00000517181 120 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
RTCAO00442 EIF4A1P12-201ENST00000551910 141 ntBASIC1.98□□□□□ -2.09
RTCAO00442 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.98□□□□□ -2.09
RTCAO00442 MIR1273D-201ENST00000577266 86 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AL355073.2-201ENST00000612106 557 ntBASIC1.98□□□□□ -2.09
RTCAO00442 AC137590.2-201ENST00000619709 240 ntBASIC1.98□□□□□ -2.09
RTCAO00442 SCARNA4-201ENST00000629045 128 ntBASIC1.98□□□□□ -2.09
RTCAO00442 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RTCAO00442 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTCAO00442 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RTCAO00442 WWP1P1-201ENST00000466609 2769 ntBASIC1.97□□□□□ -2.09
RTCAO00442 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RTCAO00442 U3.9-201ENST00000363823 204 ntBASIC1.97□□□□□ -2.09
RTCAO00442 Y_RNA.184-201ENST00000363884 108 ntBASIC1.97□□□□□ -2.09
RTCAO00442 Y_RNA.490-201ENST00000384413 102 ntBASIC1.97□□□□□ -2.09
RTCAO00442 RNU6-160P-201ENST00000384591 107 ntBASIC1.97□□□□□ -2.09
RTCAO00442 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RTCAO00442 AL357139.1-201ENST00000407792 426 ntBASIC1.97□□□□□ -2.09
RTCAO00442 RNA5SP425-201ENST00000410336 112 ntBASIC1.97□□□□□ -2.09
RTCAO00442 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
RTCAO00442 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.97□□□□□ -2.09
RTCAO00442 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
RTCAO00442 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.97□□□□□ -2.09
RTCAO00442 AL353705.4-201ENST00000449661 238 ntBASIC1.97□□□□□ -2.09
RTCAO00442 AC107399.1-201ENST00000451226 265 ntBASIC1.97□□□□□ -2.09
RTCAO00442 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
RTCAO00442 SNRPGP7-201ENST00000469016 106 ntBASIC1.97□□□□□ -2.09
RTCAO00442 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTCAO00442 RNU6-965P-201ENST00000516721 96 ntBASIC1.97□□□□□ -2.09
RTCAO00442 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.97□□□□□ -2.09
RTCAO00442 UBE2V2P2-201ENST00000587677 504 ntBASIC1.97□□□□□ -2.09
RTCAO00442 AC018462.2-201ENST00000605375 395 ntBASIC1.97□□□□□ -2.09
RTCAO00442 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
RTCAO00442 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RTCAO00442 MTND4P12-201ENST00000498999 1377 ntBASIC1.97□□□□□ -2.09
RTCAO00442 SNORA72.1-201ENST00000363485 129 ntBASIC1.96□□□□□ -2.1
RTCAO00442 SNORD115-32-201ENST00000364079 82 ntBASIC1.96□□□□□ -2.1
RTCAO00442 Y_RNA.303-201ENST00000364998 94 ntBASIC1.96□□□□□ -2.1
RTCAO00442 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.96□□□□□ -2.1
RTCAO00442 SNORA36A-201ENST00000384221 132 ntBASIC1.96□□□□□ -2.1
RTCAO00442 MIR548F5-201ENST00000408421 86 ntBASIC1.96□□□□□ -2.1
RTCAO00442 RNA5SP501-201ENST00000410990 112 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AL358453.1-201ENST00000422522 250 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.96□□□□□ -2.1
RTCAO00442 AL035666.1-201ENST00000446195 348 ntBASIC1.96□□□□□ -2.1
RTCAO00442 MTND4P18-201ENST00000447010 465 ntBASIC1.96□□□□□ -2.1
RTCAO00442 FTH1P25-201ENST00000447665 469 ntBASIC1.96□□□□□ -2.1
RTCAO00442 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AC007215.1-201ENST00000464893 276 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AF186996.7-201ENST00000492781 209 ntBASIC1.96□□□□□ -2.1
RTCAO00442 RNU6-273P-201ENST00000516937 96 ntBASIC1.96□□□□□ -2.1
RTCAO00442 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.96□□□□□ -2.1
RTCAO00442 AC010900.2-201ENST00000604508 210 ntBASIC1.96□□□□□ -2.1
RTCAO00442 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.96□□□□□ -2.1
RTCAO00442 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
RTCAO00442 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
RTCAO00442 RNU6-137P-201ENST00000363680 108 ntBASIC1.95□□□□□ -2.1
RTCAO00442 SNORD115-8-201ENST00000363856 82 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RNU4-9P-201ENST00000364951 139 ntBASIC1.95□□□□□ -2.1
RTCAO00442 SNORD115-38-201ENST00000365037 82 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RNA5SP126-201ENST00000365092 109 ntBASIC1.95□□□□□ -2.1
RTCAO00442 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
RTCAO00442 MIR934-201ENST00000401241 83 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RPL37P10-201ENST00000412884 288 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC243428.1-201ENST00000421099 264 ntBASIC1.95□□□□□ -2.1
RTCAO00442 DPH3P2-201ENST00000422618 250 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.95□□□□□ -2.1
RTCAO00442 OR2AQ1P-201ENST00000451972 200 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RPL23AP75-201ENST00000491601 451 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC103851.1-201ENST00000506833 274 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.95□□□□□ -2.1
RTCAO00442 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.95□□□□□ -2.1
RTCAO00442 AC026782.1-201ENST00000512952 449 ntBASIC1.95□□□□□ -2.1
RTCAO00442 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
RTCAO00442 MRPS36P4-201ENST00000534436 298 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.95□□□□□ -2.1
RTCAO00442 AC005668.1-201ENST00000571142 476 ntBASIC1.95□□□□□ -2.1
RTCAO00442 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.95□□□□□ -2.1
RTCAO00442 SNRPGP19-201ENST00000603826 189 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
RTCAO00442 MIR6128-201ENST00000615528 109 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC063943.3-201ENST00000615562 356 ntBASIC1.95□□□□□ -2.1
RTCAO00442 MIR1248-201ENST00000629190 106 ntBASIC1.95□□□□□ -2.1
RTCAO00442 AC099654.5-201ENST00000636479 350 ntBASIC1.95□□□□□ -2.1
RTCAO00442 TPTEP1-208ENST00000636884 213 ntBASIC1.95□□□□□ -2.1
RTCAO00442 RNU1-76P-201ENST00000362903 159 ntBASIC1.94□□□□□ -2.1
RTCAO00442 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
RTCAO00442 U8.10-201ENST00000384260 133 ntBASIC1.94□□□□□ -2.1
RTCAO00442 RNU6-842P-201ENST00000384269 107 ntBASIC1.94□□□□□ -2.1
RTCAO00442 RNU6-378P-201ENST00000384324 107 ntBASIC1.94□□□□□ -2.1
RTCAO00442 RNA5SP494-201ENST00000410653 129 ntBASIC1.94□□□□□ -2.1
RTCAO00442 USP9YP30-201ENST00000430729 455 ntBASIC1.94□□□□□ -2.1
RTCAO00442 RPS3AP52-201ENST00000435639 297 ntBASIC1.94□□□□□ -2.1
RTCAO00442 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
RTCAO00442 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms