Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK1AO00322 AC090115.3-201ENST00000553218 849 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 MIR4709-201ENST00000577272 72 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC015688.6-201ENST00000577737 104 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 MIR3913-1-201ENST00000577744 102 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 NIFKP6-201ENST00000598115 845 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC025449.1-201ENST00000603896 529 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 CTHRC1P1-201ENST00000605383 469 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 AC104458.1-201ENST00000608243 463 ntBASIC0.94□□□□□ -2.26
UPK1AO00322 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK1AO00322 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK1AO00322 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK1AO00322 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
UPK1AO00322 RNU6-1120P-201ENST00000362988 108 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 RNU6-903P-201ENST00000391270 109 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK1AO00322 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.93□□□□□ -2.26
UPK1AO00322 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK1AO00322 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK1AO00322 MTND4P32-201ENST00000437189 1237 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK1AO00322 AL356010.1-201ENST00000456364 102 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 RNU7-138P-201ENST00000459479 64 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 RNU6-1037P-201ENST00000459571 107 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 COX6CP14-201ENST00000469580 174 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 ARL2BPP4-201ENST00000506854 471 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 HIF1AP1-201ENST00000553642 175 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 MIR5006-201ENST00000583027 110 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 AP003465.2-201ENST00000602571 373 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 AC005562.2-201ENST00000618264 111 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 AL603755.1-201ENST00000619504 163 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 MIR8065-201ENST00000620577 100 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.93□□□□□ -2.26
UPK1AO00322 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK1AO00322 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 BX322639.1-202ENST00000423987 2213 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU1-22P-201ENST00000363334 158 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 MIR618-201ENST00000385287 98 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 SNORD73A-201ENST00000386062 65 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AL117342.1-201ENST00000404861 406 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RPL37P10-201ENST00000412884 288 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 MTATP6P18-201ENST00000417994 673 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK1AO00322 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK1AO00322 AC074290.1-201ENST00000448883 135 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU7-63P-201ENST00000459054 62 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU7-34P-201ENST00000459394 64 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK1AO00322 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK1AO00322 RNU6-1146P-201ENST00000516282 102 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU6-948P-201ENST00000516374 107 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU7-40P-201ENST00000516397 64 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNU6-612P-201ENST00000516909 102 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK1AO00322 AC016256.1-201ENST00000547971 354 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AC026470.2-201ENST00000561492 181 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 CYP3A52P-201ENST00000563326 91 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AL391840.1-201ENST00000571144 367 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.92□□□□□ -2.26
UPK1AO00322 MIR5583-1-201ENST00000580941 59 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AL353149.1-201ENST00000610667 244 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 AC040896.1-201ENST00000613819 479 ntBASIC0.92□□□□□ -2.26
UPK1AO00322 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 RNU6-227P-201ENST00000362865 103 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 RNU6-1235P-201ENST00000384559 107 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.91□□□□□ -2.26
UPK1AO00322 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK1AO00322 MTCO2P34-201ENST00000421994 607 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 AL358934.1-201ENST00000432346 324 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1AO00322 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1AO00322 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1AO00322 RNU6-498P-201ENST00000459468 107 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK1AO00322 AC005840.1-201ENST00000498412 377 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.91□□□□□ -2.26
UPK1AO00322 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1AO00322 RPL39P5-202ENST00000512505 151 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 MTND4P7-201ENST00000523876 130 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.91□□□□□ -2.26
UPK1AO00322 MTATP6P3-201ENST00000581686 676 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 AL365434.2-201ENST00000607979 234 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 AP001596.2-201ENST00000608410 312 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 TCL6_2.1-201ENST00000615162 119 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 MIR338-201ENST00000636369 67 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 AC099654.5-201ENST00000636479 350 ntBASIC0.91□□□□□ -2.26
UPK1AO00322 RNA5SP432-201ENST00000362480 116 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 RNA5SP259-201ENST00000365541 109 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 MIR515-2-201ENST00000384883 83 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 MIR515-1-201ENST00000384884 83 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 RNA5SP219-201ENST00000390940 113 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 MIR1253-201ENST00000408273 105 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 RNA5SP494-201ENST00000410653 129 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 RPL23AP36-201ENST00000413895 458 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.9□□□□□ -2.27
UPK1AO00322 MTCYBP8-201ENST00000422855 651 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 MTCO2P11-201ENST00000431069 680 ntBASIC0.9□□□□□ -2.27
UPK1AO00322 AC004386.2-201ENST00000441858 148 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms