Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PDLIM1O00151 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.7□□□□□ -2.14
PDLIM1O00151 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
PDLIM1O00151 RNU6-23P-201ENST00000363283 107 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 RNU6-1026P-201ENST00000384465 108 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 SNORA8-201ENST00000384574 139 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 MIR1283-2-201ENST00000408621 87 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AL513185.2-201ENST00000425543 193 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.69□□□□□ -2.14
PDLIM1O00151 MTND1P11-201ENST00000456661 876 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 RNU7-66P-201ENST00000459469 62 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.69□□□□□ -2.14
PDLIM1O00151 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 RNU6-1314P-201ENST00000517139 104 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.69□□□□□ -2.14
PDLIM1O00151 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.69□□□□□ -2.14
PDLIM1O00151 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.69□□□□□ -2.14
PDLIM1O00151 POLR3GP2-201ENST00000588366 668 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AL158827.2-201ENST00000602494 330 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 RPL17P51-201ENST00000605218 238 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AC019193.3-201ENST00000609144 554 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 AL691447.3-201ENST00000635020 330 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PDLIM1O00151 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.69□□□□□ -2.14
PDLIM1O00151 RNU5B-2P-201ENST00000363036 113 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 Y_RNA.157-201ENST00000363638 102 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 SNORA18.2-201ENST00000383865 132 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 MIR1289-2-201ENST00000408360 111 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 FCF1P9-201ENST00000412546 282 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PDLIM1O00151 AC123900.1-201ENST00000420390 96 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 MTND4LP16-201ENST00000440828 295 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 AC130509.1-201ENST00000464158 433 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 ATP5EP1-201ENST00000510257 156 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 AP003465.2-201ENST00000602571 373 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 AP000907.4-201ENST00000604143 237 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 AL590240.4-201ENST00000616908 390 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.68□□□□□ -2.14
PDLIM1O00151 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
PDLIM1O00151 RNA5SP493-201ENST00000364115 91 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 Y_RNA.212-201ENST00000364177 102 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 SNORD114-6-201ENST00000364393 72 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 Y_RNA.332-201ENST00000365271 113 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 SNORD116-11-201ENST00000383882 92 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 RNU6-1013P-201ENST00000384180 107 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 RNU6-784P-201ENST00000384330 106 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.67□□□□□ -2.14
PDLIM1O00151 AL357134.1-201ENST00000445848 426 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.67□□□□□ -2.14
PDLIM1O00151 TOMM22P6-201ENST00000465035 409 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.67□□□□□ -2.14
PDLIM1O00151 AC011352.1-201ENST00000512300 793 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 ACA59.1-201ENST00000515966 143 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
PDLIM1O00151 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.67□□□□□ -2.14
PDLIM1O00151 MIR3942-201ENST00000585264 109 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.67□□□□□ -2.14
PDLIM1O00151 LINC02555-201ENST00000563933 1951 ntBASIC1.67□□□□□ -2.14
PDLIM1O00151 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PDLIM1O00151 SNORD31B-201ENST00000364977 69 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 RNU6-831P-201ENST00000384548 107 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 MIR517A-201ENST00000385001 87 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 MIR1277-201ENST00000408536 78 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 EIF1P1-201ENST00000421436 341 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 AC139712.2-201ENST00000424302 339 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 AL035666.1-201ENST00000446195 348 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.66□□□□□ -2.14
PDLIM1O00151 MTCO2P30-201ENST00000503662 364 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.66□□□□□ -2.14
PDLIM1O00151 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.66□□□□□ -2.14
PDLIM1O00151 AC124303.1-201ENST00000605703 360 ntBASIC1.66□□□□□ -2.14
PDLIM1O00151 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.66□□□□□ -2.14
PDLIM1O00151 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDLIM1O00151 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
PDLIM1O00151 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 Y_RNA.132-201ENST00000363421 102 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
PDLIM1O00151 RNU6-192P-201ENST00000391253 100 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDLIM1O00151 RNA5SP501-201ENST00000410990 112 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC087477.1-201ENST00000465747 340 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 RPL23AP75-201ENST00000491601 451 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AF186996.7-201ENST00000492781 209 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 RNU6-864P-201ENST00000516256 108 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC087441.2-201ENST00000529141 262 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.65□□□□□ -2.15
PDLIM1O00151 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 MIR5006-201ENST00000583027 110 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC016727.2-201ENST00000603988 621 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC007014.2-201ENST00000615581 479 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC002553.4-201ENST00000616896 331 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC005562.2-201ENST00000618264 111 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC137590.2-201ENST00000619709 240 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AC098679.4-201ENST00000624241 654 ntBASIC1.65□□□□□ -2.15
PDLIM1O00151 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.65□□□□□ -2.15
PDLIM1O00151 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms