Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 MIR3942-201ENST00000585264 109 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 AC104984.5-201ENST00000586878 94 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 AC016727.2-201ENST00000603988 621 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 AC068137.4-201ENST00000638485 296 ntBASIC1.66□□□□□ -2.14
LRIT2A6NDA9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
LRIT2A6NDA9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.65□□□□□ -2.14
LRIT2A6NDA9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
LRIT2A6NDA9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LRIT2A6NDA9 Y_RNA.6-201ENST00000362350 114 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RNA5SP118-201ENST00000410385 109 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RPL23AP6-201ENST00000446637 472 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC016925.1-201ENST00000458303 298 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC130509.1-201ENST00000464158 433 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC092989.1-201ENST00000481235 277 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RPS29P25-201ENST00000481709 171 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC116337.1-201ENST00000509680 687 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 RNU6-273P-201ENST00000516937 96 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 MIR3124-201ENST00000582636 67 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AL158827.2-201ENST00000602494 330 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 U1.36-201ENST00000620684 176 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AC009033.1-201ENST00000624279 431 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 AL691447.3-201ENST00000635020 330 ntBASIC1.65□□□□□ -2.15
LRIT2A6NDA9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LRIT2A6NDA9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LRIT2A6NDA9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 SNORD50.1-201ENST00000362987 71 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 Y_RNA.157-201ENST00000363638 102 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 MIR517A-201ENST00000385001 87 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 MIR549A-201ENST00000385268 96 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC009161.1-201ENST00000417306 376 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 DAP3P1-201ENST00000441522 278 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AL353572.1-201ENST00000442490 417 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC007677.1-201ENST00000445757 515 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 RNU1-131P-201ENST00000458943 161 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 RNA5SP57-201ENST00000459463 123 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC087477.1-201ENST00000465747 340 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 RNVU1-2-201ENST00000516326 135 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC005562.2-201ENST00000618264 111 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 AC073869.6-201ENST00000640656 341 ntBASIC1.64□□□□□ -2.15
LRIT2A6NDA9 SNORD116-11-201ENST00000383882 92 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 SNORA48.1-201ENST00000390879 135 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
LRIT2A6NDA9 EIF4EP2-201ENST00000422816 654 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 AC079354.2-201ENST00000453523 154 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 MTCO2P30-201ENST00000503662 364 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 HMGB3P17-201ENST00000504195 649 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.63□□□□□ -2.15
LRIT2A6NDA9 AC011352.1-201ENST00000512300 793 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 RNU6-864P-201ENST00000516256 108 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.63□□□□□ -2.15
LRIT2A6NDA9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.63□□□□□ -2.15
LRIT2A6NDA9 POLR3GP2-201ENST00000588366 668 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 AC022513.1-201ENST00000624512 117 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.63□□□□□ -2.15
LRIT2A6NDA9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 CBX3P1-201ENST00000325243 554 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 RNU6-545P-201ENST00000362681 104 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 RNU6-831P-201ENST00000384548 107 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 MIR487A-201ENST00000385009 80 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 RNA5SP212-201ENST00000391223 107 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AL358453.1-201ENST00000422522 250 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AC010531.2-201ENST00000465012 153 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 RPL23AP75-201ENST00000491601 451 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AC026470.2-201ENST00000561492 181 ntBASIC1.62□□□□□ -2.15
LRIT2A6NDA9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.62□□□□□ -2.15
LRIT2A6NDA9 MIR4255-201ENST00000579351 72 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms