Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.324-201ENST00000365165 102 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 RNU6-809P-201ENST00000384461 107 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MIR660-201ENST00000385235 97 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MIR549A-201ENST00000385268 96 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MIR653-201ENST00000385279 96 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MIR1287-201ENST00000408492 90 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 RNU2-39P-201ENST00000410604 198 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC090960.1-201ENST00000421072 306 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 SNAP23P1-201ENST00000433229 246 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 NDUFA5P4-201ENST00000436704 385 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MTND3P1-201ENST00000441336 220 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 DAP3P1-201ENST00000441522 278 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC117522.1-201ENST00000509821 380 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC025465.4-201ENST00000513422 638 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 SNORA68.3-201ENST00000515906 83 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 RNU6-948P-201ENST00000516374 107 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 RNU6-567P-201ENST00000516746 107 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC010376.1-201ENST00000522101 334 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AL356157.2-201ENST00000605122 111 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC097065.2-201ENST00000608159 533 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 AC005520.5-201ENST00000613926 164 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 MTND4P5-201ENST00000435821 1374 ntBASIC0.18□□□□□ -2.38
TRAV27A0A087WT01 RNU6-562P-201ENST00000362731 107 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 RNU6-163P-201ENST00000384396 106 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AL451046.2-201ENST00000403074 277 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 MTCYBP36-201ENST00000404146 440 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 MIR1253-201ENST00000408273 105 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC005002.2-201ENST00000438228 269 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 RNA5SP436-201ENST00000516020 115 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC109479.2-201ENST00000517842 174 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC023050.3-201ENST00000541142 333 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC090049.2-201ENST00000550377 109 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 ZNF519P3-201ENST00000557158 1032 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC112187.2-201ENST00000604345 283 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC008250.2-201ENST00000615261 205 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 7SK.10-201ENST00000621414 298 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 U6.108-201ENST00000637764 58 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 AL589743.1-201ENST00000551932 2712 ntBASIC0.17□□□□□ -2.38
TRAV27A0A087WT01 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-199P-201ENST00000362954 107 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.97-201ENST00000363094 102 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.110-201ENST00000363220 99 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.226-201ENST00000364337 114 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-1303P-201ENST00000364841 107 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU4-48P-201ENST00000365559 182 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-975P-201ENST00000384296 105 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNY1P14-201ENST00000384426 108 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-45P-201ENST00000384471 107 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 MIR518E-201ENST00000385252 88 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-440P-201ENST00000390882 105 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 SNORD89-201ENST00000390981 114 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 SNORA16.2-201ENST00000390991 127 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-1093P-201ENST00000391194 107 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC245047.3-201ENST00000429428 127 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC010486.2-201ENST00000505572 483 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC022493.2-201ENST00000506122 481 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AK3P2-201ENST00000507976 429 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 SNORA70.12-201ENST00000516084 153 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-917P-201ENST00000516294 104 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 RNU6-685P-201ENST00000517088 95 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC016957.1-201ENST00000534895 309 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC146944.4-201ENST00000602697 718 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AL158042.1-201ENST00000605338 460 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 PRELID3BP2-201ENST00000605362 201 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC064807.4-201ENST00000607201 407 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AL158211.2-201ENST00000607282 395 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 AC073349.3-201ENST00000617616 186 ntBASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV27A0A087WT01 Y_RNA.116-201ENST00000363292 103 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 MIR558-201ENST00000384920 94 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 AL034345.1-201ENST00000407768 123 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 AL445305.1-201ENST00000432577 575 ntBASIC0.15□□□□□ -2.39
TRAV27A0A087WT01 AC119618.1-201ENST00000434191 222 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms