Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 PRPS1P1-201ENST00000445305 876 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC079781.2-201ENST00000446424 169 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC008628.2-201ENST00000502605 298 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AL022345.2-201ENST00000606307 135 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC064807.4-201ENST00000607201 407 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AL353149.1-201ENST00000610667 244 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC027335.2-201ENST00000624030 375 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC022418.1-201ENST00000624118 445 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 AC068647.2-201ENST00000637380 353 ntBASIC0.86□□□□□ -2.27
USH1CQ9Y6N9 SNORA18.2-201ENST00000383865 132 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 Y_RNA.480-201ENST00000384364 102 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 RNU6-393P-201ENST00000384475 107 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 RNU6-925P-201ENST00000384629 104 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MIR454-201ENST00000390180 115 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 GPR143P-201ENST00000434155 205 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 C1DP4-201ENST00000455429 424 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 RNU7-182P-201ENST00000459009 62 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MTCO2P6-201ENST00000463134 685 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MTND2P14-201ENST00000482139 351 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC103851.1-201ENST00000506833 274 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 RNU6-113P-201ENST00000516653 101 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AP003072.2-201ENST00000527756 676 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MIR4775-201ENST00000581168 75 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AL391646.1-201ENST00000603860 190 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC005520.5-201ENST00000613926 164 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 AC106800.4-201ENST00000614905 153 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MIR7111-201ENST00000619751 72 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 SEPT14P19-203ENST00000633205 211 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MIR338-201ENST00000636369 67 ntBASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
USH1CQ9Y6N9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 BX322639.1-202ENST00000423987 2213 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU4-28P-201ENST00000364739 141 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU6-1029P-201ENST00000384109 107 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU6-1093P-201ENST00000391194 107 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU4-46P-201ENST00000410818 138 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AC012306.1-201ENST00000423267 114 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 HSFY7P-201ENST00000432672 318 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 HSFY8P-201ENST00000437934 318 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 HSFY5P-201ENST00000453726 309 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RPS29P15-201ENST00000458329 171 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AC079382.1-201ENST00000493346 557 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 SNORD116-28-201ENST00000516123 91 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 CYCSP23-201ENST00000519781 313 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AC011604.1-201ENST00000545978 196 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 FAM106DP-201ENST00000586416 501 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AP001836.1-201ENST00000604675 523 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AC002044.1-201ENST00000606707 158 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 AL136221.1-201ENST00000621449 509 ntBASIC0.84□□□□□ -2.27
USH1CQ9Y6N9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 SNORA72.2-201ENST00000365028 127 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 RNU6-434P-201ENST00000384376 107 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 SNORD70.1-201ENST00000391007 85 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 MIR300-201ENST00000401138 83 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 MIR1283-1-201ENST00000408494 87 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 AC090960.1-201ENST00000421072 306 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 HMGN1P12-201ENST00000499125 195 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 LRRC34P2-201ENST00000514850 553 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 FABP5P5-201ENST00000515537 406 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 RNU2-69P-201ENST00000516061 100 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 SNORA25.17-201ENST00000517184 124 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 MIR4753-201ENST00000585119 83 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 RSL24D1P11-201ENST00000591045 491 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
USH1CQ9Y6N9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 RNU6-1214P-201ENST00000363650 109 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 SNORA33-201ENST00000363664 130 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 RNU6-74P-201ENST00000384235 107 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 RNU6-195P-201ENST00000411352 109 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 SNORD11.1-201ENST00000459482 85 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 ARL2BPP4-201ENST00000506854 471 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 SUMO2P16-201ENST00000519475 264 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 MTND2P32-201ENST00000521584 1038 ntBASIC0.82□□□□□ -2.28
USH1CQ9Y6N9 AC109446.2-201ENST00000567872 497 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms