Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SNORD116.1-201ENST00000365628 92 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-607P-201ENST00000411283 108 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC114491.1-201ENST00000416095 246 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RPS24P1-201ENST00000438550 371 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-1098P-201ENST00000516772 96 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC013828.2-201ENST00000532487 235 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC007834.2-201ENST00000536310 343 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 EIF4A1P12-201ENST00000551910 141 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MIR5589-201ENST00000579442 60 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AL139022.2-201ENST00000606934 443 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 PCGEM1.1-201ENST00000613431 131 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC040896.1-201ENST00000613819 479 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC106800.4-201ENST00000614905 153 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 Y_RNA.46-201ENST00000362695 102 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 Y_RNA.302-201ENST00000364997 102 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-1257P-201ENST00000384625 110 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MIR942-201ENST00000401111 86 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RPS25P9-201ENST00000435591 252 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MTCO3P18-201ENST00000440206 761 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 EEF1A1P39-201ENST00000440791 250 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 RNU7-14P-201ENST00000459331 62 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AP000797.1-201ENST00000478870 387 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MTCO3P7-201ENST00000510008 774 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC022432.1-201ENST00000595739 310 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC012557.2-201ENST00000605919 418 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
SCN10AQ9Y5Y9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-61P-201ENST00000365528 109 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 MIR605-201ENST00000385078 83 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 SNORD12-201ENST00000391002 90 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-387P-201ENST00000411331 105 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 RPS26P48-201ENST00000491713 339 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 HMGN1P12-201ENST00000499125 195 ntBASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN10AQ9Y5Y9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 SNORA32.2-201ENST00000384049 122 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 Y_RNA.480-201ENST00000384364 102 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AC019070.1-201ENST00000415008 1024 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 RNU6-197P-201ENST00000516680 100 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AC024995.1-201ENST00000523014 93 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 MIR3118-1-201ENST00000581787 76 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 BCRP9-201ENST00000605312 388 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 RNU1-119P-201ENST00000391122 165 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 MIR1283-1-201ENST00000408494 87 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 SNORD124-201ENST00000459577 104 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 MTND3P25-201ENST00000509243 135 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AC109810.1-201ENST00000534066 224 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 AL357312.1-201ENST00000603879 298 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 TCL6_2.1-201ENST00000615162 119 ntBASIC0.41□□□□□ -2.34
SCN10AQ9Y5Y9 MTND4P14-201ENST00000435799 1354 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 RNU4-79P-201ENST00000362764 141 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 SNORD32A-201ENST00000364805 84 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 MTATP6P20-201ENST00000414147 562 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 SNAP23P1-201ENST00000433229 246 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-377P-201ENST00000515965 102 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 RNU2-34P-201ENST00000516534 121 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 uc_338.11-201ENST00000619132 160 ntBASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN10AQ9Y5Y9 RNU6-1106P-201ENST00000390845 107 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 Z99497.1-201ENST00000421282 135 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC011233.1-201ENST00000422812 283 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 SNRPGP7-201ENST00000469016 106 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC117522.1-201ENST00000509821 380 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AP002453.2-201ENST00000533503 320 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC016256.1-201ENST00000547971 354 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AC110760.3-201ENST00000598794 467 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AL162424.1-201ENST00000602325 221 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AL021368.1-201ENST00000607490 540 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 SNORA4.2-201ENST00000365313 147 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 MIR653-201ENST00000385279 96 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 CDK8P2-201ENST00000415020 547 ntBASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN10AQ9Y5Y9 AL133396.1-201ENST00000432048 687 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms