Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 MED13P1-201ENST00000428342 171 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 SCARNA8-201ENST00000515924 131 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 RNA5SP330-201ENST00000517096 96 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 MTND1P36-201ENST00000522384 936 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AC109446.1-201ENST00000566172 220 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AL606834.3-201ENST00000602615 496 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AC022217.4-201ENST00000604389 163 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 MIR1264-201ENST00000616374 69 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 AC067863.3-201ENST00000624172 122 ntBASIC-0.59□□□□□ -2.5
AP4S1Q9Y587 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 RNA5SP275-201ENST00000363936 118 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 SNORA1.1-201ENST00000364671 133 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 SNORA2.2-201ENST00000365473 135 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 SNORA76.2-201ENST00000517095 137 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AC012414.2-201ENST00000559474 187 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 MIR4764-201ENST00000580680 88 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AC012507.3-201ENST00000603556 477 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AC104073.3-201ENST00000610942 955 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 MIR8054-201ENST00000620877 86 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 BX322639.1-202ENST00000423987 2213 ntBASIC-0.6□□□□□ -2.51
AP4S1Q9Y587 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 RNU4-41P-201ENST00000364426 143 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 RNU6-701P-201ENST00000384059 107 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 SNORA8.2-201ENST00000384372 139 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 MTCYBP2-201ENST00000407745 171 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 SNORD111-201ENST00000408139 94 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC096531.1-201ENST00000419107 107 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AL590632.1-201ENST00000424289 371 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 TPT1P7-201ENST00000458300 517 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 HMGN1P10-201ENST00000474557 553 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 RNA5SP94-201ENST00000516917 108 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC105185.1-201ENST00000518705 535 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC024995.1-201ENST00000523014 93 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 ZNF971P-201ENST00000562068 1249 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 AC110760.3-201ENST00000598794 467 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 SCARNA4-202ENST00000625402 129 ntBASIC-0.61□□□□□ -2.51
AP4S1Q9Y587 RNU6-369P-201ENST00000362515 102 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 RNU6-395P-201ENST00000365662 106 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MIR106A-201ENST00000384870 81 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MRPS10P2-201ENST00000431226 381 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AL627311.1-201ENST00000431514 115 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MTCYBP39-201ENST00000437562 491 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MTND1P31-201ENST00000449206 961 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 snoU13.21-201ENST00000459368 105 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AL163973.1-201ENST00000484753 577 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MTND3P5-201ENST00000512798 333 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 RN7SKP287-201ENST00000516546 266 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 RNU6-914P-201ENST00000516749 109 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 RNU6-64P-201ENST00000517119 105 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 AC122133.1-201ENST00000613964 233 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MIR2909-201ENST00000617113 69 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MIR6755-201ENST00000619993 66 ntBASIC-0.62□□□□□ -2.51
AP4S1Q9Y587 MIR1-1-201ENST00000362147 71 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 RNU6-418P-201ENST00000384035 107 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 RNA5SP467-201ENST00000391274 118 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 MTND4P15-201ENST00000437913 1033 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 MTND2P20-201ENST00000440805 661 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 RPL18AP17-201ENST00000455326 198 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC022447.4-201ENST00000504053 364 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC113347.3-201ENST00000509113 148 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 SNORD111.1-201ENST00000516421 86 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC115990.1-201ENST00000526957 301 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AK6P2-201ENST00000549020 471 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC005730.3-201ENST00000583067 366 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 MIR4743-201ENST00000584576 69 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AC024060.1-201ENST00000607052 494 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 AP000676.3-201ENST00000623299 569 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 MTND5P42-201ENST00000637720 498 ntBASIC-0.63□□□□□ -2.51
AP4S1Q9Y587 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms