Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RNU6-127P-201ENST00000390897 107 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 RNU6-679P-201ENST00000391003 106 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD75.1-201ENST00000408373 60 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AL133217.1-201ENST00000450980 425 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 AP002360.4-201ENST00000606980 481 ntBASIC-0.56□□□□□ -2.5
UBE2D4Q9Y2X8 SNORA18.1-201ENST00000363418 128 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 MIR1827-201ENST00000408549 66 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD83.1-201ENST00000411362 77 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 MRPS36P1-201ENST00000421291 307 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 RPS29P8-201ENST00000445109 171 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 AC010531.2-201ENST00000465012 153 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 RPL39P36-201ENST00000490784 156 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 AC025465.4-201ENST00000513422 638 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 MIR4743-201ENST00000584576 69 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 AL034555.1-201ENST00000604816 211 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 SEPT14P17-201ENST00000617978 177 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 AL513423.1-201ENST00000621695 132 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 MIR338-201ENST00000636369 67 ntBASIC-0.57□□□□□ -2.5
UBE2D4Q9Y2X8 RNU6-199P-201ENST00000362954 107 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 SNORA33-201ENST00000363664 130 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 RNU4-9P-201ENST00000364951 139 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD49B-201ENST00000365172 72 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD116-20-201ENST00000384529 92 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 RNA5SP109-201ENST00000391010 116 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 SNORA75.6-201ENST00000391318 127 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 RNU6-994P-201ENST00000410507 111 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AL022718.1-201ENST00000412004 84 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AC092427.1-201ENST00000439177 601 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AC234772.3-201ENST00000602277 528 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 AL096861.1-201ENST00000610899 123 ntBASIC-0.58□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD115-24-201ENST00000363528 82 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD31B-201ENST00000364977 69 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MIR196A2-201ENST00000385189 110 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MIR301A-201ENST00000385261 86 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 STAG3L5P-204ENST00000443759 179 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MTND4P19-201ENST00000446659 478 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 ART2BP-201ENST00000453501 499 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AL122001.1-201ENST00000457027 370 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 LINC01399-202ENST00000458450 244 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 SNORA31.10-201ENST00000516482 106 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 RNU2-12P-201ENST00000517216 168 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AC022868.1-201ENST00000517767 391 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MIR4300-201ENST00000581016 96 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AC091135.1-201ENST00000585943 307 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AC133794.1-201ENST00000602731 914 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 AC018889.1-201ENST00000605372 397 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 FTX_2.1-201ENST00000618816 94 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MIR1322-201ENST00000638013 71 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 MTND4P4-201ENST00000439033 1366 ntBASIC-0.59□□□□□ -2.5
UBE2D4Q9Y2X8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.6□□□□□ -2.5
UBE2D4Q9Y2X8 RNU4-15P-201ENST00000362613 141 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 RNY4P3-201ENST00000365254 95 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 MIR938-201ENST00000401216 83 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AL121578.1-201ENST00000428051 892 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 MRPL42P4-201ENST00000453267 443 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AC091860.1-201ENST00000505723 432 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-917P-201ENST00000516294 104 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 RNU6-856P-201ENST00000516959 98 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AK6P2-201ENST00000549020 471 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AL390123.1-201ENST00000603216 237 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 MTND3P19-201ENST00000603825 345 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AL136363.2-201ENST00000604173 851 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 AL670379.3-201ENST00000605040 251 ntBASIC-0.6□□□□□ -2.51
UBE2D4Q9Y2X8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 MIR217-201ENST00000384817 110 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 MIR660-201ENST00000385235 97 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 RPS26P42-201ENST00000413485 326 ntBASIC-0.61□□□□□ -2.51
UBE2D4Q9Y2X8 AL590632.1-201ENST00000424289 371 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms