Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 MIR548AC-201ENST00000585049 88 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 AC241585.2-209ENST00000638217 143 ntBASIC2.17□□□□□ -2.06
NOTCH3Q9UM47 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 MIR34A-201ENST00000385130 110 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 MIR708-201ENST00000390708 88 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 SNORD12B-201ENST00000410433 91 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC022431.1-201ENST00000450941 438 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 SNORA25.12-201ENST00000516202 82 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU6-971P-201ENST00000516920 106 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC074140.1-201ENST00000621617 208 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC010332.2-201ENST00000613083 1904 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 SNORA25.1-201ENST00000362326 128 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.4-201ENST00000362333 112 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU6-653P-201ENST00000363074 106 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.262-201ENST00000364641 102 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU5E-7P-201ENST00000365290 117 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.446-201ENST00000384178 104 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 Y_RNA.570-201ENST00000384750 101 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU2-2P-201ENST00000410396 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AL513331.1-201ENST00000411908 397 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 MTND4LP9-201ENST00000427694 174 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 POLR2KP2-201ENST00000438155 177 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC009237.7-201ENST00000447357 229 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RPS20P10-201ENST00000451209 253 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC005921.1-201ENST00000510589 286 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU7-110P-201ENST00000516891 62 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC027176.1-201ENST00000560204 514 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU2-4P-201ENST00000606190 192 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AC005046.1-201ENST00000608515 625 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.15-201ENST00000611544 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.16-201ENST00000613119 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.12-201ENST00000613778 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.9-201ENST00000615427 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.11-201ENST00000616345 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.2-201ENST00000616535 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.3-201ENST00000617785 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.19-201ENST00000618602 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 RNU2-1-201ENST00000618664 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.6-201ENST00000619225 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.5-201ENST00000619465 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 U2.10-201ENST00000620268 191 ntBASIC2.16□□□□□ -2.06
NOTCH3Q9UM47 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
NOTCH3Q9UM47 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
NOTCH3Q9UM47 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
NOTCH3Q9UM47 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
NOTCH3Q9UM47 MIR412-201ENST00000362142 91 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.796-201ENST00000364268 102 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 Y_RNA.799-201ENST00000364992 102 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 MIR513C-201ENST00000401352 84 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 RN7SKP223-201ENST00000410582 62 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 AL135786.1-201ENST00000415892 214 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 BTF3P11-201ENST00000426582 477 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 AL592045.1-201ENST00000429867 352 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 AC009296.1-201ENST00000443146 155 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 SNRPGP5-201ENST00000456003 220 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 RPS3P1-201ENST00000456781 192 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 RPL36AP21-201ENST00000490372 323 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 SNORA40.9-201ENST00000515895 93 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1095P-201ENST00000516148 108 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 IGKV3-31-201ENST00000523109 329 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 DEFB131C-201ENST00000528817 165 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 RPL21P9-201ENST00000556149 474 ntBASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.15□□□□□ -2.07
NOTCH3Q9UM47 MIR539-201ENST00000365690 78 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RNU6-1286P-201ENST00000383871 107 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RPS4XP3-201ENST00000398541 413 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC010154.1-201ENST00000425857 269 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 PTGES3P4-201ENST00000426243 356 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 Z82210.1-201ENST00000440037 231 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 AC078817.1-201ENST00000492623 435 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 RNU6-612P-201ENST00000516909 102 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 CYCSP26-201ENST00000534107 320 ntBASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.14□□□□□ -2.07
NOTCH3Q9UM47 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms