Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 uc_338.14-201ENST00000613162 166 ntBASIC2.43□□□□□ -2.02
SIX4Q9UIU6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
SIX4Q9UIU6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.80-201ENST00000362996 102 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU5B-2P-201ENST00000363036 113 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 SNORD114-19-201ENST00000363072 75 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU4-42P-201ENST00000364738 142 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU4-9P-201ENST00000364951 139 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU1-115P-201ENST00000365329 160 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 Y_RNA.485-201ENST00000384395 102 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 MIR606-201ENST00000384851 96 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 MIR186-201ENST00000384988 86 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 SNORA12.2-201ENST00000391040 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 SNORA26.3-201ENST00000391119 136 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AL590135.1-201ENST00000422215 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC019205.3-201ENST00000424573 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 MTCYBP10-201ENST00000424905 650 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC096644.2-201ENST00000429278 159 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC016700.2-201ENST00000446011 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RN7SKP210-201ENST00000459176 261 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC087477.1-201ENST00000465747 340 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RPL36AP48-201ENST00000485521 314 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC015911.1-201ENST00000495111 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC021146.2-201ENST00000504736 556 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU4-77P-201ENST00000516692 156 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 RNU6-1137P-201ENST00000517073 99 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC079598.5-201ENST00000547460 117 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC073410.2-201ENST00000603240 332 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 SNORD58B-201ENST00000607313 66 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AL355802.3-201ENST00000607571 545 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC087588.2-201ENST00000617667 426 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 AC007792.1-201ENST00000623023 402 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 ZNF72P-201ENST00000425869 1908 ntBASIC2.42□□□□□ -2.02
SIX4Q9UIU6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
SIX4Q9UIU6 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AL359854.1-201ENST00000614203 1594 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC092268.1-201ENST00000342691 405 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 SNORA63C-201ENST00000364578 129 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RNU6-142P-201ENST00000384019 107 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 MIR487A-201ENST00000385009 80 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 CYCSP48-201ENST00000417124 323 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC007098.1-201ENST00000420122 367 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 MTND2P23-201ENST00000422990 651 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AIMP1P2-201ENST00000425294 312 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC078809.1-201ENST00000427601 140 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AL353752.1-201ENST00000454946 260 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 snoU13.30-201ENST00000458951 104 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RNU7-169P-201ENST00000459456 61 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 MIR4765-201ENST00000585007 77 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC006504.6-201ENST00000590142 199 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AC138305.3-201ENST00000624988 240 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 SNORD98-201ENST00000636377 67 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
SIX4Q9UIU6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SIX4Q9UIU6 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.02
SIX4Q9UIU6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNA5SP393-201ENST00000363423 117 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU6-639P-201ENST00000384074 107 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MIR32-201ENST00000384965 70 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MIR625-201ENST00000385047 85 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MIR190B-201ENST00000401119 79 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 MRPL42P3-201ENST00000401492 326 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RN7SKP223-201ENST00000410582 62 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 AC113618.1-201ENST00000416747 285 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 Z82209.1-201ENST00000422141 2135 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.4□□□□□ -2.03
SIX4Q9UIU6 snoU13.14-201ENST00000459372 104 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 RNU7-175P-201ENST00000515915 61 ntBASIC2.4□□□□□ -2.03
SIX4Q9UIU6 SNORA25.10-201ENST00000515926 124 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms