Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 RPS29P21-201ENST00000496272 170 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 MTCYBP18-201ENST00000501056 747 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 ARL2BPP4-201ENST00000506854 471 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 RNU2-34P-201ENST00000516534 121 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC59Q9P031 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC59Q9P031 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC59Q9P031 MIR4424-201ENST00000585257 86 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 AC016727.2-201ENST00000603988 621 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 AC064836.2-201ENST00000609491 462 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 MIR338-201ENST00000636369 67 ntBASIC1.13□□□□□ -2.23
CCDC59Q9P031 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
CCDC59Q9P031 AC016717.1-201ENST00000448918 286 ntBASIC1.12□□□□□ -2.23
CCDC59Q9P031 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC59Q9P031 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC59Q9P031 MIR5006-201ENST00000583027 110 ntBASIC1.12□□□□□ -2.23
CCDC59Q9P031 AC087752.4-201ENST00000605911 462 ntBASIC1.12□□□□□ -2.23
CCDC59Q9P031 MIR6845-201ENST00000613182 61 ntBASIC1.12□□□□□ -2.23
CCDC59Q9P031 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC59Q9P031 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC59Q9P031 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC59Q9P031 RNU5B-2P-201ENST00000363036 113 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 SNORA4.2-201ENST00000365313 147 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 RNU6-1103P-201ENST00000384150 107 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 MIR194-1-201ENST00000384892 85 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 U8.13-201ENST00000390842 128 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 RNA5SP494-201ENST00000410653 129 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC59Q9P031 AL353193.1-201ENST00000421444 268 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 MTCO2P19-201ENST00000427513 598 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC59Q9P031 MTCO3P38-201ENST00000468910 766 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 RNU6-189P-201ENST00000516120 101 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 Y_RNA.695-201ENST00000516715 107 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC104576.1-201ENST00000524225 88 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC026470.2-201ENST00000561492 181 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC087683.1-201ENST00000591187 441 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.11□□□□□ -2.23
CCDC59Q9P031 AC104458.1-201ENST00000608243 463 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 TCL6_2.1-201ENST00000615162 119 ntBASIC1.11□□□□□ -2.23
CCDC59Q9P031 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC59Q9P031 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC59Q9P031 SNORA33-201ENST00000363664 130 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 RNU6-1317P-201ENST00000364582 104 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 MIR549A-201ENST00000385268 96 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 COX6CP10-201ENST00000416832 224 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 EIF1P1-201ENST00000421436 341 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 USP9YP14-201ENST00000430663 563 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 TPTE2P5-203ENST00000458118 728 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 U8.21-201ENST00000459536 136 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 RNU6-1038P-201ENST00000516516 104 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC087854.1-201ENST00000519706 414 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC025423.5-201ENST00000550230 219 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC091544.4-201ENST00000555268 342 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC015720.1-201ENST00000565251 277 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC59Q9P031 AL359697.1-201ENST00000624879 587 ntBASIC1.1□□□□□ -2.23
CCDC59Q9P031 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC59Q9P031 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CCDC59Q9P031 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CCDC59Q9P031 Y_RNA.123-201ENST00000363338 102 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 SNORA75-201ENST00000384158 137 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 RNU6-975P-201ENST00000384296 105 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 RNU6-1235P-201ENST00000384559 107 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AL049545.1-201ENST00000401856 572 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 RPS26P42-201ENST00000413485 326 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AL606489.2-201ENST00000433886 234 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC59Q9P031 NFU1P2-201ENST00000448700 469 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC59Q9P031 RNU6-498P-201ENST00000459468 107 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 UBL5P3-201ENST00000475112 231 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 CENPUP1-201ENST00000526649 1202 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 MRPS36P4-201ENST00000534436 298 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AC011494.1-201ENST00000596454 237 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AC073648.5-201ENST00000603502 305 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AC092747.3-201ENST00000603769 301 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AP000907.4-201ENST00000604143 237 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AC007684.1-201ENST00000609671 477 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AL158063.1-201ENST00000615349 536 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 AC103705.1-201ENST00000619013 241 ntBASIC1.09□□□□□ -2.23
CCDC59Q9P031 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CCDC59Q9P031 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC59Q9P031 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
CCDC59Q9P031 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms