Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNY4P28-201ENST00000365281 93 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 Y_RNA.793-201ENST00000411222 111 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AC017083.1-201ENST00000428093 483 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 Z75741.1-201ENST00000446793 314 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AL133547.1-201ENST00000448546 220 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 PRELID3BP1-201ENST00000457142 540 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 RNU2-12P-201ENST00000517216 168 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.54□□□□□ -1.84
UBP1Q9NZI7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
UBP1Q9NZI7 RPL21P9-201ENST00000556149 474 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 MIR3922-201ENST00000585192 84 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.54□□□□□ -1.84
UBP1Q9NZI7 FTX_2.1-201ENST00000618816 94 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.54□□□□□ -1.84
UBP1Q9NZI7 AC009093.8-201ENST00000641769 292 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
UBP1Q9NZI7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
UBP1Q9NZI7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
UBP1Q9NZI7 MIR411-201ENST00000362239 96 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 SNORD87-201ENST00000364849 89 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 SNORA62.3-201ENST00000365110 153 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 SNORA67.2-201ENST00000384300 149 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 Y_RNA.597-201ENST00000410463 100 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
UBP1Q9NZI7 AC024067.1-201ENST00000426199 223 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 SNORD105B-201ENST00000458770 79 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 Y_RNA.644-201ENST00000459006 113 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 AC106707.2-201ENST00000484182 374 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 Y_RNA.674-201ENST00000516362 113 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 RNU6-966P-201ENST00000516479 104 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 Z83818.1-201ENST00000603584 150 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 MIR8058-201ENST00000615737 89 ntBASIC3.53□□□□□ -1.84
UBP1Q9NZI7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.53□□□□□ -1.84
UBP1Q9NZI7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBP1Q9NZI7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBP1Q9NZI7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 RNU6-1289P-201ENST00000384431 106 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 MIR586-201ENST00000385035 97 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AL603908.1-201ENST00000406098 201 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 U6atac.2-201ENST00000408644 118 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AL357552.1-201ENST00000445254 415 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.638-201ENST00000459374 113 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 SRIP1-201ENST00000489235 288 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AC140059.1-201ENST00000489238 361 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 RNU6-191P-201ENST00000516295 94 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
UBP1Q9NZI7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.52□□□□□ -1.85
UBP1Q9NZI7 AL513302.2-201ENST00000562313 1842 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 RNU4-80P-201ENST00000363200 141 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.217-201ENST00000364214 105 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 MIR1294-201ENST00000408503 142 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.626-201ENST00000411288 95 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 CYCSP4-201ENST00000429682 331 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 SNORD2.1-201ENST00000458762 69 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 Y_RNA.641-201ENST00000459414 105 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC091153.1-201ENST00000466297 402 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 RNU5F-4P-201ENST00000516581 114 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 CBX3P4-201ENST00000538909 354 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 MIR4429-201ENST00000580105 73 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AC073349.3-201ENST00000617616 186 ntBASIC3.51□□□□□ -1.85
UBP1Q9NZI7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBP1Q9NZI7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 AC110774.1-201ENST00000623567 2018 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 RNU6-454P-201ENST00000364292 107 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 MIR670-201ENST00000390142 98 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 AC126124.2-201ENST00000413542 321 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 RPS12P18-201ENST00000442381 270 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.5□□□□□ -1.85
UBP1Q9NZI7 RPL27AP5-201ENST00000469428 449 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 RPL21P129-201ENST00000491732 478 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 AC083906.5-201ENST00000503722 328 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 SNORA70.19-201ENST00000516717 90 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 MIR7515-201ENST00000637837 67 ntBASIC3.5□□□□□ -1.85
UBP1Q9NZI7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms