Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC105245.1-201ENST00000581934 244 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 MIR5690-201ENST00000583739 73 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC005014.2-201ENST00000607795 599 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC126177.8-201ENST00000618339 1015 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 AC022140.2-201ENST00000623500 188 ntBASIC2.05□□□□□ -2.08
NDE1Q9NXR1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
NDE1Q9NXR1 RNU4-82P-201ENST00000362443 140 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 SNORA29-201ENST00000384183 140 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MIR487A-201ENST00000385009 80 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MIR1261-201ENST00000408659 82 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MTCO2P27-201ENST00000420740 428 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC243428.1-201ENST00000421099 264 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AF228730.4-201ENST00000421457 183 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MTCO3P29-201ENST00000432119 779 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MICF-203ENST00000432679 129 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AL353705.4-201ENST00000449661 238 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 snoU13.14-201ENST00000459372 104 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 HMGB1P35-201ENST00000503360 598 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC022447.4-201ENST00000504053 364 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC097473.1-201ENST00000508142 408 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AL034555.1-201ENST00000604816 211 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC233981.2-201ENST00000611524 1614 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 AC010329.5-201ENST00000623497 2174 ntBASIC2.04□□□□□ -2.08
NDE1Q9NXR1 MTND4P27-201ENST00000450813 1354 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 RNA5SP432-201ENST00000362480 116 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 RNU6-596P-201ENST00000365395 98 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 CYCSP48-201ENST00000417124 323 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AL358453.1-201ENST00000422522 250 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 EIF4EP2-201ENST00000422816 654 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC236972.2-201ENST00000434979 310 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC093303.1-201ENST00000514549 295 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC109329.1-201ENST00000518744 317 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AL713866.2-201ENST00000603579 219 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 Z98751.3-201ENST00000604447 521 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AC069294.1-201ENST00000608397 350 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 MIR6817-201ENST00000615588 66 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.03□□□□□ -2.08
NDE1Q9NXR1 MIR7157-201ENST00000635801 60 ntBASIC2.03□□□□□ -2.08
NDE1Q9NXR1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
NDE1Q9NXR1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
NDE1Q9NXR1 AC092268.1-201ENST00000342691 405 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.813-201ENST00000364639 102 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 Y_RNA.315-201ENST00000365117 102 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 MIR549A-201ENST00000385268 96 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 SNORA26.3-201ENST00000391119 136 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC078809.1-201ENST00000427601 140 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AL513124.1-201ENST00000450410 614 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 ELOCP24-201ENST00000456370 334 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 RPL23AP75-201ENST00000491601 451 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 RN7SL636P-201ENST00000497504 294 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC022493.2-201ENST00000506122 481 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC115990.1-201ENST00000526957 301 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 CYCSP26-201ENST00000534107 320 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 MIR5571-201ENST00000577998 113 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 MIR5696-201ENST00000578474 85 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC010928.2-201ENST00000588017 287 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AL670379.2-201ENST00000604983 252 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AL356157.2-201ENST00000605122 111 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 AC080078.3-201ENST00000605407 463 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 ZNF299P-201ENST00000406845 1804 ntBASIC2.02□□□□□ -2.09
NDE1Q9NXR1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
NDE1Q9NXR1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNU4-15P-201ENST00000362613 141 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNU5B-2P-201ENST00000363036 113 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNA5SP68-201ENST00000363885 119 ntBASIC2.01□□□□□ -2.09
NDE1Q9NXR1 RNU6-142P-201ENST00000384019 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms