Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL078605.1-201ENST00000603529 500 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC006157.1-201ENST00000611750 366 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AC090517.3-201ENST00000625170 141 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 AL450472.1-202ENST00000637286 180 ntBASIC2.4□□□□□ -2.03
PCDH9Q9HC56 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDH9Q9HC56 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RNU4-9P-201ENST00000364951 139 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 XGY1-201ENST00000381172 446 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 SNORA12.2-201ENST00000391040 156 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 EIF4EP4-201ENST00000424916 578 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC096644.2-201ENST00000429278 159 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RPL30P4-201ENST00000429309 333 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AL137792.2-201ENST00000443484 235 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 snoU13.30-201ENST00000458951 104 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RN7SKP210-201ENST00000459176 261 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RNU7-169P-201ENST00000459456 61 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 UBE2DNL-203ENST00000474922 222 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RPL30P10-201ENST00000488148 337 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 SNORD116.3-201ENST00000517176 78 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AP003072.1-201ENST00000531740 145 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 SUB1P3-201ENST00000564581 315 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AL356280.1-201ENST00000603614 379 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 Z98751.3-201ENST00000604447 521 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC099654.10-201ENST00000640395 161 ntBASIC2.39□□□□□ -2.03
PCDH9Q9HC56 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PCDH9Q9HC56 AC080128.1-201ENST00000474389 1917 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 SNORA63-201ENST00000363450 132 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 RNU6-1210P-201ENST00000363775 107 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 RNU4-56P-201ENST00000364700 142 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.395-201ENST00000383945 109 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 SNORA67.4-201ENST00000384688 142 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR487A-201ENST00000385009 80 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 CYCSP48-201ENST00000417124 323 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC007098.1-201ENST00000420122 367 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC012306.1-201ENST00000423267 114 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MTCYBP10-201ENST00000424905 650 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AL160004.2-201ENST00000432935 350 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AL163540.1-201ENST00000485382 386 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 SCARNA3-201ENST00000517097 143 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 ANP32BP3-201ENST00000559213 706 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR5571-201ENST00000577998 113 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR5701-3-201ENST00000578890 82 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR5701-1-201ENST00000585138 82 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 SNRPGP17-201ENST00000603780 214 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AL034555.1-201ENST00000604816 211 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AL670379.2-201ENST00000604983 252 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AL355802.3-201ENST00000607571 545 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MIR5701-2-201ENST00000615634 82 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC007485.1-201ENST00000616755 206 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AC007742.2-201ENST00000618226 398 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 AP000560.1-201ENST00000624150 1937 ntBASIC2.38□□□□□ -2.03
PCDH9Q9HC56 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDH9Q9HC56 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 ZNF72P-201ENST00000425869 1908 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 RNU5B-2P-201ENST00000363036 113 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.496-201ENST00000384444 101 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.577-201ENST00000384794 101 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.605-201ENST00000410577 105 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 PMCHL1-202ENST00000423102 261 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AL035666.1-201ENST00000446195 348 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 OR2AQ1P-201ENST00000451972 200 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AL353752.1-201ENST00000454946 260 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 snoU13.14-201ENST00000459372 104 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC090515.1-201ENST00000465295 476 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC023141.11-201ENST00000508864 202 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.706-201ENST00000516933 99 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms