Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MIR487A-201ENST00000385009 80 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AL590135.1-201ENST00000422215 156 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC012306.1-201ENST00000423267 114 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC019205.3-201ENST00000424573 156 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC016700.2-201ENST00000446011 156 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 HMGB1P35-201ENST00000503360 598 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC040926.1-201ENST00000530195 238 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC027288.2-201ENST00000553028 243 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 Z98751.3-201ENST00000604447 521 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.96
USP29Q9HBJ7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
USP29Q9HBJ7 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
USP29Q9HBJ7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
USP29Q9HBJ7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RNU6-222P-201ENST00000362438 107 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 U3.13-201ENST00000364804 214 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MIR186-201ENST00000384988 86 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MIR568-201ENST00000385036 95 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MIR153-2-201ENST00000385225 87 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RPL21P75-201ENST00000396599 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RPL21P28-201ENST00000401418 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RPS26P42-201ENST00000413485 326 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC138623.1-201ENST00000418060 216 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AL590556.1-201ENST00000423231 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 snoU13.6-201ENST00000458785 104 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RPL21P39-201ENST00000463605 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MTATP8P1-201ENST00000467115 207 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC087190.1-201ENST00000484462 480 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC107032.1-201ENST00000485945 480 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC132942.1-201ENST00000486753 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC093591.1-201ENST00000491435 481 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 RPL21P16-201ENST00000495531 483 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC090617.3-201ENST00000573670 475 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MIR3136-201ENST00000583498 78 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 AC008121.3-201ENST00000618726 433 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 SNORD98-201ENST00000636377 67 ntBASIC2.77□□□□□ -1.97
USP29Q9HBJ7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
USP29Q9HBJ7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU6-212P-201ENST00000362642 104 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU6-1309P-201ENST00000363305 108 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 SNORD115-8-201ENST00000363856 82 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 SNORD115-38-201ENST00000365037 82 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU1-57P-201ENST00000384491 166 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 MIR1252-201ENST00000408861 65 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU6-101P-201ENST00000410323 104 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 Z98742.2-201ENST00000431564 187 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 SNORD109B-201ENST00000458961 67 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 SNORD109A-201ENST00000459128 67 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RNU7-87P-201ENST00000459343 62 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AC010655.3-201ENST00000478818 450 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RPL23AP70-201ENST00000483361 460 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 RPL36AP48-201ENST00000485521 314 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AP002770.2-201ENST00000543613 532 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AC124312.5-201ENST00000604451 268 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AL021879.1-201ENST00000611756 288 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AC005520.5-201ENST00000613926 164 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 MIR6715A-201ENST00000615929 79 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AC137590.2-201ENST00000619709 240 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.76□□□□□ -1.97
USP29Q9HBJ7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP29Q9HBJ7 AL359854.1-201ENST00000614203 1594 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
USP29Q9HBJ7 RNU4-82P-201ENST00000362443 140 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 RNU1-139P-201ENST00000391307 165 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 RNA5SP21-201ENST00000410917 96 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 MTCO3P19-201ENST00000415864 321 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 AC114482.1-201ENST00000418010 247 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 EIF1P2-201ENST00000428233 350 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 MICF-203ENST00000432679 129 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.75□□□□□ -1.97
USP29Q9HBJ7 AP000870.1-201ENST00000472927 406 ntBASIC2.75□□□□□ -1.97
USP29Q9HBJ7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.75□□□□□ -1.97
USP29Q9HBJ7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms