Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SNORA59B-202ENST00000578183 701 ntBASIC1.66□□□□□ -2.14
NXF3Q9H4D5 AP000907.4-201ENST00000604143 237 ntBASIC1.66□□□□□ -2.14
NXF3Q9H4D5 AP001836.1-201ENST00000604675 523 ntBASIC1.66□□□□□ -2.14
NXF3Q9H4D5 ELOCP5-201ENST00000604924 333 ntBASIC1.66□□□□□ -2.14
NXF3Q9H4D5 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
NXF3Q9H4D5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.66□□□□□ -2.14
NXF3Q9H4D5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.66□□□□□ -2.14
NXF3Q9H4D5 RNU1-23P-201ENST00000363361 144 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNU6-128P-201ENST00000383976 107 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNU6-611P-201ENST00000384276 104 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 MIR29B2-201ENST00000385055 81 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNA5SP465-201ENST00000391195 109 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RN7SKP61-201ENST00000410642 295 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AC078809.1-201ENST00000427601 140 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AL133396.1-201ENST00000432048 687 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.65□□□□□ -2.15
NXF3Q9H4D5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AC022447.4-201ENST00000504053 364 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RPL39P5-202ENST00000512505 151 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNU5F-2P-201ENST00000516066 82 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 RNU6-1332P-201ENST00000516666 104 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 TRAV32-201ENST00000553993 340 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 SCOCP1-201ENST00000554676 349 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 SUB1P3-201ENST00000564581 315 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 U6atac.1-201ENST00000616025 117 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 AC090617.10-201ENST00000624308 134 ntBASIC1.65□□□□□ -2.15
NXF3Q9H4D5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.414-201ENST00000384011 101 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AL591034.2-201ENST00000402839 359 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 VN1R36P-201ENST00000414936 291 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC009161.1-201ENST00000417306 376 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AL353752.1-201ENST00000454946 260 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 RPS29P27-201ENST00000463711 170 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 RNU6-1314P-201ENST00000517139 104 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC104576.1-201ENST00000524225 88 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC018630.3-201ENST00000542637 96 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 HSBP1P1-201ENST00000555205 166 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AL078605.1-201ENST00000603529 500 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC018889.1-201ENST00000605372 397 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 AC006504.8-201ENST00000621046 635 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
NXF3Q9H4D5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
NXF3Q9H4D5 MTND4P5-201ENST00000435821 1374 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 SNORA26.3-201ENST00000391119 136 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC244670.1-201ENST00000436879 112 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 MTCO3P18-201ENST00000440206 761 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 RNU6-612P-201ENST00000516909 102 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 RNU6-667P-201ENST00000517186 102 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AF235103.2-201ENST00000525753 346 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC026371.1-201ENST00000551867 419 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 CPDP1-201ENST00000579660 283 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 MIR3136-201ENST00000583498 78 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AL138726.1-201ENST00000614873 333 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
NXF3Q9H4D5 AC092268.1-201ENST00000342691 405 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 RNU6-1252P-201ENST00000363054 104 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.135-201ENST00000363439 95 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 Y_RNA.212-201ENST00000364177 102 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 RNU6-546P-201ENST00000383991 107 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 RNU6-1148P-201ENST00000410992 104 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 U8.21-201ENST00000459536 136 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 RPL9P9-202ENST00000466501 579 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC016632.1-201ENST00000503994 196 ntBASIC1.62□□□□□ -2.15
NXF3Q9H4D5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
NXF3Q9H4D5 AC025465.4-201ENST00000513422 638 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms