Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 MTND4LP26-201ENST00000518144 282 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 AC115990.1-201ENST00000526957 301 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 ZNF971P-201ENST00000562068 1249 ntBASIC-0.33□□□□□ -2.46
SCAPERQ9BY12 RNU6-654P-201ENST00000364373 107 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 RNU6-395P-201ENST00000365662 106 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 MIR518A1-201ENST00000385068 85 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 SNORD105-201ENST00000386910 85 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AL353777.1-201ENST00000425552 326 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 MRPL42P4-201ENST00000453267 443 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AC116347.2-201ENST00000514912 523 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AC023632.1-201ENST00000518463 375 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AC092634.7-201ENST00000621022 103 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 AL513423.1-201ENST00000621695 132 ntBASIC-0.34□□□□□ -2.46
SCAPERQ9BY12 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.46
SCAPERQ9BY12 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 RNU6-46P-201ENST00000383860 107 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 MIR644A-201ENST00000385262 94 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AL627311.1-201ENST00000431514 115 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 MTND1P31-201ENST00000449206 961 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 snoU13.25-201ENST00000458945 104 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 RNU7-14P-201ENST00000459331 62 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 OR9P1P-201ENST00000496431 281 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AC022447.4-201ENST00000504053 364 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 MTND3P5-201ENST00000512798 333 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 SNORA43.2-201ENST00000516652 128 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AC109446.1-201ENST00000566172 220 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 AL603839.4-201ENST00000624658 1005 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 SCARNA4-202ENST00000625402 129 ntBASIC-0.35□□□□□ -2.47
SCAPERQ9BY12 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 RNA5SP109-201ENST00000391010 116 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AL603865.2-201ENST00000401679 213 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AL133217.1-201ENST00000450980 425 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 RNU6-583P-201ENST00000516012 92 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AP002001.1-203ENST00000534002 267 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC023827.1-201ENST00000569247 97 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 MIR4293-201ENST00000584305 78 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC004223.2-201ENST00000590309 544 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 AC104408.1-201ENST00000605241 170 ntBASIC-0.36□□□□□ -2.47
SCAPERQ9BY12 MIR103A2-201ENST00000362154 78 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 MIR409-201ENST00000362237 79 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 RNA5SP323-201ENST00000391094 133 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 MIR1305-201ENST00000408300 86 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 RNA5SP451-201ENST00000410588 110 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 VPS26BP1-201ENST00000417155 755 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 SEPT7P5-201ENST00000434048 306 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 RNU6-863P-201ENST00000515989 104 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 SNORA25.12-201ENST00000516202 82 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 SNORA31.10-201ENST00000516482 106 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 RNU6-64P-201ENST00000517119 105 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 AL390123.1-201ENST00000603216 237 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 AL034555.1-201ENST00000604816 211 ntBASIC-0.37□□□□□ -2.47
SCAPERQ9BY12 RNU6-199P-201ENST00000362954 107 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RNU6-142P-201ENST00000384019 107 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RPS20P2-201ENST00000402520 389 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MTCO3P42-201ENST00000509488 518 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MTCO3P39-201ENST00000514812 518 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 SNORA40.12-201ENST00000516329 111 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RNU6-914P-201ENST00000516749 109 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AC021231.3-201ENST00000558497 370 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AL391903.3-201ENST00000612158 163 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MTND5P42-201ENST00000637720 498 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 CDR1-202ENST00000625883 1485 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MIR412-201ENST00000362142 91 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 SNORD114-5-201ENST00000362928 70 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 SNORA75B-201ENST00000384053 137 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MTND4LP11-201ENST00000422184 280 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 MTND4LP14-201ENST00000429447 288 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 AC007969.2-201ENST00000441891 191 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RPL7P55-201ENST00000450522 746 ntBASIC-0.38□□□□□ -2.47
SCAPERQ9BY12 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms