Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SNORA75.3-201ENST00000391231 150 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 SNORD111-201ENST00000408139 94 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 RNU4-63P-201ENST00000411313 118 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.39□□□□□ -2.47
ABCA3Q99758 AL353777.1-201ENST00000425552 326 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 AL157871.3-201ENST00000557231 293 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 AL136363.2-201ENST00000604173 851 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 AL592221.1-201ENST00000605266 382 ntBASIC-0.39□□□□□ -2.47
ABCA3Q99758 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.4□□□□□ -2.47
ABCA3Q99758 RNU6-701P-201ENST00000384059 107 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 MIR301A-201ENST00000385261 86 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
ABCA3Q99758 RPS20P2-201ENST00000402520 389 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 AL034345.1-201ENST00000407768 123 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 AC093019.1-201ENST00000443135 252 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 RPL7P55-201ENST00000450522 746 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
ABCA3Q99758 AC025465.4-201ENST00000513422 638 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 SUB1P2-201ENST00000556401 297 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 AC122134.1-202ENST00000569111 1201 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 MIR4742-201ENST00000581069 85 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 AC078938.1-201ENST00000620993 318 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 MIR198-201ENST00000637333 62 ntBASIC-0.4□□□□□ -2.47
ABCA3Q99758 RNU6-815P-201ENST00000384080 113 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 RNU6-952P-201ENST00000391164 108 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 MTCYBP10-201ENST00000424905 650 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 BTF3P11-201ENST00000426582 477 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.41□□□□□ -2.47
ABCA3Q99758 MTCO2P18-201ENST00000457151 658 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.41□□□□□ -2.47
ABCA3Q99758 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 AC009712.1-201ENST00000564938 316 ntBASIC-0.41□□□□□ -2.47
ABCA3Q99758 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 MIR610-201ENST00000385139 96 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 AC003071.1-201ENST00000451219 789 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 snoU109.2-201ENST00000459316 135 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 AC104136.1-201ENST00000512969 394 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.41□□□□□ -2.48
ABCA3Q99758 AC080078.2-201ENST00000603766 501 ntBASIC-0.41□□□□□ -2.48
ABCA3Q99758 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.42□□□□□ -2.48
ABCA3Q99758 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.42□□□□□ -2.48
ABCA3Q99758 SEPT7P5-201ENST00000434048 306 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 SEPT7P4-201ENST00000437076 306 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 MTND4P19-201ENST00000446659 478 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.42□□□□□ -2.48
ABCA3Q99758 ART2BP-201ENST00000453501 499 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AC245047.8-201ENST00000456455 284 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 OR9P1P-201ENST00000496431 281 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.42□□□□□ -2.48
ABCA3Q99758 RNU1-86P-201ENST00000516108 154 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 RNU1-107P-201ENST00000516617 154 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AC011979.2-201ENST00000527568 352 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AC138915.2-201ENST00000569776 97 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 MIR4666A-201ENST00000580160 79 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AC004987.4-201ENST00000603383 338 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 AL445264.1-201ENST00000621719 171 ntBASIC-0.42□□□□□ -2.48
ABCA3Q99758 SNORD56.4-201ENST00000363883 71 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 RNY4P16-201ENST00000364768 94 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 SNORD31B-201ENST00000364977 69 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 RNU6-142P-201ENST00000384019 107 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 FCF1P10-201ENST00000407590 479 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.43□□□□□ -2.48
ABCA3Q99758 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.43□□□□□ -2.48
ABCA3Q99758 AL122001.1-201ENST00000457027 370 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 SNORA70.12-201ENST00000516084 153 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 IGKV1-22-201ENST00000524313 326 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
ABCA3Q99758 AC138749.5-201ENST00000611461 208 ntBASIC-0.43□□□□□ -2.48
ABCA3Q99758 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU6-932P-201ENST00000391108 106 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AL603865.2-201ENST00000401679 213 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU4-27P-201ENST00000410889 139 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 MTCO2P34-201ENST00000421994 607 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.44□□□□□ -2.48
ABCA3Q99758 MRPL42P4-201ENST00000453267 443 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 RPS23P5-201ENST00000495419 428 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 MTND3P5-201ENST00000512798 333 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 SCARNA8-201ENST00000515924 131 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 MTND4LP26-201ENST00000518144 282 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 MTND2P7-201ENST00000521337 640 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AC004223.2-201ENST00000590309 544 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AL162424.1-201ENST00000602325 221 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AC104695.3-201ENST00000604052 296 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU6-199P-201ENST00000362954 107 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU6-796P-201ENST00000391086 107 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.44□□□□□ -2.48
ABCA3Q99758 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
ABCA3Q99758 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.44□□□□□ -2.48
ABCA3Q99758 DPPA3P3-201ENST00000603842 430 ntBASIC-0.44□□□□□ -2.48
ABCA3Q99758 MIR8064-201ENST00000612863 90 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms