Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 Y_RNA.682-201ENST00000516457 100 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AP005660.1-201ENST00000522972 293 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AP003033.1-201ENST00000527244 415 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 MIR4742-201ENST00000581069 85 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 MIR4435-1-201ENST00000582552 80 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC011712.1-201ENST00000588959 234 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC016727.2-201ENST00000603988 621 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AL022345.1-201ENST00000607292 135 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC137590.2-201ENST00000619709 240 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.78□□□□□ -2.12
RAB40CQ96S21 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RAB40CQ96S21 MTND4P5-201ENST00000435821 1374 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 Y_RNA.72-201ENST00000362894 103 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 RNU6-1026P-201ENST00000384465 108 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 MIR597-201ENST00000384968 97 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 AC123900.1-201ENST00000420390 96 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 MTCO3P46-201ENST00000425787 232 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 SNRPEP8-201ENST00000442866 260 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AL021397.1-201ENST00000451806 248 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 RNU1-54P-201ENST00000517181 120 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 DEFB131C-201ENST00000528817 165 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 MIR6128-201ENST00000615528 109 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AC005562.2-201ENST00000618264 111 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 AC130454.1-201ENST00000622948 401 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 CTSLP2-204ENST00000629029 392 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 SCARNA4-201ENST00000629045 128 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 MTND5P9-201ENST00000503854 1755 ntBASIC1.77□□□□□ -2.13
RAB40CQ96S21 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
RAB40CQ96S21 CASC19-280ENST00000642102 1351 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RAB40CQ96S21 MTND3P8-201ENST00000412909 339 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 HMGN2P38-201ENST00000423806 265 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 MTND1P2-201ENST00000430604 821 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC018634.1-201ENST00000437554 401 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 AL035666.1-201ENST00000446195 348 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC079804.2-201ENST00000490376 200 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 RN7SL636P-201ENST00000497504 294 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 RNA5SP200-201ENST00000516360 103 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC026470.2-201ENST00000561492 181 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC002984.1-201ENST00000591692 448 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 AC046143.2-201ENST00000609789 160 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.76□□□□□ -2.13
RAB40CQ96S21 AL133216.2-202ENST00000634512 349 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 LINC02555-201ENST00000563933 1951 ntBASIC1.76□□□□□ -2.13
RAB40CQ96S21 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 CBX3P1-201ENST00000325243 554 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 RNU6-23P-201ENST00000363283 107 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 RNU4-9P-201ENST00000364951 139 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 SNORD31B-201ENST00000364977 69 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 MIR549A-201ENST00000385268 96 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 AC009963.1-201ENST00000417265 157 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 RPL23AP7-203ENST00000449021 469 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 FO393415.2-201ENST00000480085 343 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 MTND5P5-201ENST00000503764 376 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 RNU2-44P-201ENST00000516795 194 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.75□□□□□ -2.13
RAB40CQ96S21 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AL590240.4-201ENST00000616908 390 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 AC243829.7-201ENST00000633081 225 ntBASIC1.75□□□□□ -2.13
RAB40CQ96S21 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
RAB40CQ96S21 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.74□□□□□ -2.13
RAB40CQ96S21 SNORD114-6-201ENST00000364393 72 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 SNORA12.2-201ENST00000391040 156 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 AC004386.2-201ENST00000441858 148 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 AC016925.1-201ENST00000458303 298 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 AC116337.1-201ENST00000509680 687 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 AC087441.2-201ENST00000529141 262 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 MIR4273-201ENST00000582824 84 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 MIR5006-201ENST00000583027 110 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 RMST_6.1-201ENST00000611980 203 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 TCL6_2.1-201ENST00000615162 119 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 DUXAP9-208ENST00000622815 614 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms